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LINC02212 (long intergenic non-protein coding RNA 2212)

Identity

Other alias-
HGNC (Hugo) LINC02212
LocusID (NCBI) 101929412
Atlas_Id 79601
Location 5p15.2  [Link to chromosome band 5p15]
Location_base_pair Starts at 10493527 and ends at 10502728 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02212   53079
Cards
Entrez_Gene (NCBI)LINC02212  101929412  long intergenic non-protein coding RNA 2212
Aliases
GeneCards (Weizmann)LINC02212
Ensembl hg19 (Hinxton)ENSG00000249396 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249396 [Gene_View]  ENSG00000249396 [Sequence]  chr5:10493527-10502728 [Contig_View]  LINC02212 [Vega]
ICGC DataPortalENSG00000249396
TCGA cBioPortalLINC02212
AceView (NCBI)LINC02212
Genatlas (Paris)LINC02212
WikiGenes101929412
SOURCE (Princeton)LINC02212
Genetics Home Reference (NIH)LINC02212
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02212  -     chr5:10493527-10502728 -  5p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02212  -     5p15.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02212 - 5p15.2 [CytoView hg19]  LINC02212 - 5p15.2 [CytoView hg38]
Mapping of homologs : NCBILINC02212 [Mapview hg19]  LINC02212 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127412
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02212
Cluster EST : UnigeneHs.508287 [ NCBI ]
CGAP (NCI)Hs.508287
Alternative Splicing GalleryENSG00000249396
Gene ExpressionLINC02212 [ NCBI-GEO ]   LINC02212 [ EBI - ARRAY_EXPRESS ]   LINC02212 [ SEEK ]   LINC02212 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02212 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929412
GTEX Portal (Tissue expression)LINC02212
Human Protein AtlasENSG00000249396-LINC02212 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02212
DMDM Disease mutations101929412
Blocks (Seattle)LINC02212
Human Protein Atlas [tissue]ENSG00000249396-LINC02212 [tissue]
Protein Interaction databases
FunCoupENSG00000249396
BioGRIDLINC02212
STRING (EMBL)LINC02212
ZODIACLINC02212
Ontologies - Pathways
Huge Navigator LINC02212 [HugePedia]
snp3D : Map Gene to Disease101929412
BioCentury BCIQLINC02212
ClinGenLINC02212
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929412
Clinical trialLINC02212
Miscellaneous
canSAR (ICR)LINC02212 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02212
EVEXLINC02212
GoPubMedLINC02212
iHOPLINC02212
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:13 CEST 2018

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