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LINC02214 (long intergenic non-protein coding RNA 2214)

Identity

Other alias-
HGNC (Hugo) LINC02214
LocusID (NCBI) 102467223
Atlas_Id 80178
Location 5q23.1  [Link to chromosome band 5q23]
Location_base_pair Starts at 116743302 and ends at 116762209 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02214   53081
Cards
Entrez_Gene (NCBI)LINC02214  102467223  long intergenic non-protein coding RNA 2214
Aliases
GeneCards (Weizmann)LINC02214
Ensembl hg19 (Hinxton)ENSG00000251311 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251311 [Gene_View]  ENSG00000251311 [Sequence]  chr5:116743302-116762209 [Contig_View]  LINC02214 [Vega]
ICGC DataPortalENSG00000251311
TCGA cBioPortalLINC02214
AceView (NCBI)LINC02214
Genatlas (Paris)LINC02214
WikiGenes102467223
SOURCE (Princeton)LINC02214
Genetics Home Reference (NIH)LINC02214
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02214  -     chr5:116743302-116762209 -  5q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02214  -     5q23.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02214 - 5q23.1 [CytoView hg19]  LINC02214 - 5q23.1 [CytoView hg38]
Mapping of homologs : NCBILINC02214 [Mapview hg19]  LINC02214 [Mapview hg38]
Gene and transcription
Genbank (Entrez)H87838
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02214
Cluster EST : UnigeneHs.570916 [ NCBI ]
CGAP (NCI)Hs.570916
Alternative Splicing GalleryENSG00000251311
Gene ExpressionLINC02214 [ NCBI-GEO ]   LINC02214 [ EBI - ARRAY_EXPRESS ]   LINC02214 [ SEEK ]   LINC02214 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02214 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102467223
GTEX Portal (Tissue expression)LINC02214
Human Protein AtlasENSG00000251311-LINC02214 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02214
DMDM Disease mutations102467223
Blocks (Seattle)LINC02214
Human Protein Atlas [tissue]ENSG00000251311-LINC02214 [tissue]
Protein Interaction databases
FunCoupENSG00000251311
BioGRIDLINC02214
STRING (EMBL)LINC02214
ZODIACLINC02214
Ontologies - Pathways
Huge Navigator LINC02214 [HugePedia]
snp3D : Map Gene to Disease102467223
BioCentury BCIQLINC02214
ClinGenLINC02214
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102467223
Clinical trialLINC02214
Miscellaneous
canSAR (ICR)LINC02214 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02214
EVEXLINC02214
GoPubMedLINC02214
iHOPLINC02214
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:14 CEST 2018

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