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LINC02218 (long intergenic non-protein coding RNA 2218)

Identity

Other alias-
HGNC (Hugo) LINC02218
LocusID (NCBI) 102723526
Atlas_Id 79492
Location 5p15.1  [Link to chromosome band 5p15]
Location_base_pair Starts at 17444010 and ends at 17483946 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02218   53085
Cards
Entrez_Gene (NCBI)LINC02218  102723526  long intergenic non-protein coding RNA 2218
Aliases
GeneCards (Weizmann)LINC02218
Ensembl hg19 (Hinxton)ENSG00000249662 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249662 [Gene_View]  ENSG00000249662 [Sequence]  chr5:17444010-17483946 [Contig_View]  LINC02218 [Vega]
ICGC DataPortalENSG00000249662
TCGA cBioPortalLINC02218
AceView (NCBI)LINC02218
Genatlas (Paris)LINC02218
WikiGenes102723526
SOURCE (Princeton)LINC02218
Genetics Home Reference (NIH)LINC02218
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02218  -     chr5:17444010-17483946 +  5p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02218  -     5p15.1   [Description]    (hg19-Feb_2009)
LINC02218 - 5p15.1 [CytoView hg19]  LINC02218 - 5p15.1 [CytoView hg38]
Mapping of homologs : NCBILINC02218 [Mapview hg19]  LINC02218 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02218
Alternative Splicing GalleryENSG00000249662
Gene ExpressionLINC02218 [ NCBI-GEO ]   LINC02218 [ EBI - ARRAY_EXPRESS ]   LINC02218 [ SEEK ]   LINC02218 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02218 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723526
GTEX Portal (Tissue expression)LINC02218
Human Protein AtlasENSG00000249662-LINC02218 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02218
DMDM Disease mutations102723526
Blocks (Seattle)LINC02218
Human Protein Atlas [tissue]ENSG00000249662-LINC02218 [tissue]
Protein Interaction databases
FunCoupENSG00000249662
BioGRIDLINC02218
STRING (EMBL)LINC02218
ZODIACLINC02218
Ontologies - Pathways
Huge Navigator LINC02218 [HugePedia]
snp3D : Map Gene to Disease102723526
BioCentury BCIQLINC02218
ClinGenLINC02218
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723526
Clinical trialLINC02218
Miscellaneous
canSAR (ICR)LINC02218 (select the gene name)
DataMed IndexLINC02218
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02218
EVEXLINC02218
GoPubMedLINC02218
iHOPLINC02218
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:36:01 CEST 2019

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