Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02219 (long intergenic non-protein coding RNA 2219)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02219
LocusID (NCBI) 102467655
Atlas_Id 80124
Location 5q13.1  [Link to chromosome band 5q13]
Location_base_pair Starts at 68189876 and ends at 68198407 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC02219   53086
Cards
Entrez_Gene (NCBI)LINC02219    long intergenic non-protein coding RNA 2219
Aliases
GeneCards (Weizmann)LINC02219
Ensembl hg19 (Hinxton)ENSG00000253787 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253787 [Gene_View]  ENSG00000253787 [Sequence]  chr5:68189876-68198407 [Contig_View]  LINC02219 [Vega]
ICGC DataPortalENSG00000253787
TCGA cBioPortalLINC02219
AceView (NCBI)LINC02219
Genatlas (Paris)LINC02219
SOURCE (Princeton)LINC02219
Genetics Home Reference (NIH)LINC02219
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02219  -     chr5:68189876-68198407 +  5q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02219  -     5q13.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02219 - 5q13.1 [CytoView hg19]  LINC02219 - 5q13.1 [CytoView hg38]
ImmunoBaseENSG00000253787
Genome Data Viewer NCBILINC02219 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA393216
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02219
Gene ExpressionLINC02219 [ NCBI-GEO ]   LINC02219 [ EBI - ARRAY_EXPRESS ]   LINC02219 [ SEEK ]   LINC02219 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02219 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02219 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102467655
GTEX Portal (Tissue expression)LINC02219
Human Protein AtlasENSG00000253787-LINC02219 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02219
Human Protein Atlas [tissue]ENSG00000253787-LINC02219 [tissue]
Protein Interaction databases
BioGRIDLINC02219
STRING (EMBL)LINC02219
ZODIACLINC02219
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC02219
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sun Jan 16 19:02:54 CET 2022

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.