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LINC02219 (long intergenic non-protein coding RNA 2219)

Identity

Other alias-
HGNC (Hugo) LINC02219
LocusID (NCBI) 102467655
Atlas_Id 80124
Location 5q13.1  [Link to chromosome band 5q13]
Location_base_pair Starts at 68189876 and ends at 68198407 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02219   53086
Cards
Entrez_Gene (NCBI)LINC02219  102467655  long intergenic non-protein coding RNA 2219
Aliases
GeneCards (Weizmann)LINC02219
Ensembl hg19 (Hinxton)ENSG00000253787 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253787 [Gene_View]  ENSG00000253787 [Sequence]  chr5:68189876-68198407 [Contig_View]  LINC02219 [Vega]
ICGC DataPortalENSG00000253787
TCGA cBioPortalLINC02219
AceView (NCBI)LINC02219
Genatlas (Paris)LINC02219
WikiGenes102467655
SOURCE (Princeton)LINC02219
Genetics Home Reference (NIH)LINC02219
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02219  -     chr5:68189876-68198407 +  5q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02219  -     5q13.1   [Description]    (hg19-Feb_2009)
LINC02219 - 5q13.1 [CytoView hg19]  LINC02219 - 5q13.1 [CytoView hg38]
Mapping of homologs : NCBILINC02219 [Mapview hg19]  LINC02219 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA393216
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02219
Cluster EST : UnigeneHs.544102 [ NCBI ]
CGAP (NCI)Hs.544102
Alternative Splicing GalleryENSG00000253787
Gene ExpressionLINC02219 [ NCBI-GEO ]   LINC02219 [ EBI - ARRAY_EXPRESS ]   LINC02219 [ SEEK ]   LINC02219 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02219 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102467655
GTEX Portal (Tissue expression)LINC02219
Human Protein AtlasENSG00000253787-LINC02219 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02219
DMDM Disease mutations102467655
Blocks (Seattle)LINC02219
Human Protein Atlas [tissue]ENSG00000253787-LINC02219 [tissue]
Protein Interaction databases
FunCoupENSG00000253787
BioGRIDLINC02219
STRING (EMBL)LINC02219
ZODIACLINC02219
Ontologies - Pathways
Huge Navigator LINC02219 [HugePedia]
snp3D : Map Gene to Disease102467655
BioCentury BCIQLINC02219
ClinGenLINC02219
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102467655
Clinical trialLINC02219
Miscellaneous
canSAR (ICR)LINC02219 (select the gene name)
DataMed IndexLINC02219
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02219
EVEXLINC02219
GoPubMedLINC02219
iHOPLINC02219
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:36:01 CEST 2019

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