Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LINC02230 (long intergenic non-protein coding RNA 2230)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02230
LocusID (NCBI) 105379033
Atlas_Id 79258
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 73337906 and ends at 73338763 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC02230   53099
Cards
Entrez_Gene (NCBI)LINC02230    long intergenic non-protein coding RNA 2230
Aliases
GeneCards (Weizmann)LINC02230
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:73337906-73338763 [Contig_View]  LINC02230 [Vega]
TCGA cBioPortalLINC02230
AceView (NCBI)LINC02230
Genatlas (Paris)LINC02230
SOURCE (Princeton)LINC02230
Genetics Home Reference (NIH)LINC02230
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02230  -     chr5:73337906-73338763 +  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02230  -     5q13.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC02230 - 5q13.2 [CytoView hg19]  LINC02230 - 5q13.2 [CytoView hg38]
Genome Data Viewer NCBILINC02230 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AW086201
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02230
Gene ExpressionLINC02230 [ NCBI-GEO ]   LINC02230 [ EBI - ARRAY_EXPRESS ]   LINC02230 [ SEEK ]   LINC02230 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02230 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02230 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105379033
GTEX Portal (Tissue expression)LINC02230
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02230
Protein Interaction databases
BioGRIDLINC02230
STRING (EMBL)LINC02230
ZODIACLINC02230
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC02230
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:02:56 CET 2022

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