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LINC02230 (long intergenic non-protein coding RNA 2230)

Identity

Other alias-
HGNC (Hugo) LINC02230
LocusID (NCBI) 105379033
Atlas_Id 79258
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 73337906 and ends at 73338763 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02230   53099
Cards
Entrez_Gene (NCBI)LINC02230  105379033  long intergenic non-protein coding RNA 2230
Aliases
GeneCards (Weizmann)LINC02230
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr5:73337906-73338763 [Contig_View]  LINC02230 [Vega]
TCGA cBioPortalLINC02230
AceView (NCBI)LINC02230
Genatlas (Paris)LINC02230
WikiGenes105379033
SOURCE (Princeton)LINC02230
Genetics Home Reference (NIH)LINC02230
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02230  -     chr5:73337906-73338763 +  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02230  -     5q13.2   [Description]    (hg19-Feb_2009)
LINC02230 - 5q13.2 [CytoView hg19]  LINC02230 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBILINC02230 [Mapview hg19]  LINC02230 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW086201
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02230
Cluster EST : UnigeneHs.145178 [ NCBI ]
CGAP (NCI)Hs.145178
Gene ExpressionLINC02230 [ NCBI-GEO ]   LINC02230 [ EBI - ARRAY_EXPRESS ]   LINC02230 [ SEEK ]   LINC02230 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02230 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105379033
GTEX Portal (Tissue expression)LINC02230
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02230
DMDM Disease mutations105379033
Blocks (Seattle)LINC02230
Protein Interaction databases
BioGRIDLINC02230
STRING (EMBL)LINC02230
ZODIACLINC02230
Ontologies - Pathways
Huge Navigator LINC02230 [HugePedia]
snp3D : Map Gene to Disease105379033
BioCentury BCIQLINC02230
ClinGenLINC02230
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105379033
Clinical trialLINC02230
Miscellaneous
canSAR (ICR)LINC02230 (select the gene name)
DataMed IndexLINC02230
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02230
EVEXLINC02230
GoPubMedLINC02230
iHOPLINC02230
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Apr 30 13:36:03 CEST 2019

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