Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02232 (long intergenic non-protein coding RNA 2232)

Identity

Alias_symbol (synonym)RP11-707A18.1
Other alias-
HGNC (Hugo) LINC02232
LocusID (NCBI) 401134
Atlas_Id 79826
Location 4q13.1  [Link to chromosome band 4q13]
Location_base_pair Starts at 64914281 and ends at 65004500 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02232   53103
Cards
Entrez_Gene (NCBI)LINC02232  401134  long intergenic non-protein coding RNA 2232
Aliases
GeneCards (Weizmann)LINC02232
Ensembl hg19 (Hinxton)ENSG00000250125 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250125 [Gene_View]  ENSG00000250125 [Sequence]  chr4:64914281-65004500 [Contig_View]  LINC02232 [Vega]
ICGC DataPortalENSG00000250125
TCGA cBioPortalLINC02232
AceView (NCBI)LINC02232
Genatlas (Paris)LINC02232
WikiGenes401134
SOURCE (Princeton)LINC02232
Genetics Home Reference (NIH)LINC02232
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02232  -     chr4:64914281-65004500 -  4q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02232  -     4q13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02232 - 4q13.1 [CytoView hg19]  LINC02232 - 4q13.1 [CytoView hg38]
Mapping of homologs : NCBILINC02232 [Mapview hg19]  LINC02232 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040544
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02232
Cluster EST : UnigeneHs.165899 [ NCBI ]
CGAP (NCI)Hs.165899
Alternative Splicing GalleryENSG00000250125
Gene ExpressionLINC02232 [ NCBI-GEO ]   LINC02232 [ EBI - ARRAY_EXPRESS ]   LINC02232 [ SEEK ]   LINC02232 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02232 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401134
GTEX Portal (Tissue expression)LINC02232
Human Protein AtlasENSG00000250125-LINC02232 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02232
DMDM Disease mutations401134
Blocks (Seattle)LINC02232
Human Protein Atlas [tissue]ENSG00000250125-LINC02232 [tissue]
Protein Interaction databases
FunCoupENSG00000250125
BioGRIDLINC02232
STRING (EMBL)LINC02232
ZODIACLINC02232
Ontologies - Pathways
Huge Navigator LINC02232 [HugePedia]
snp3D : Map Gene to Disease401134
BioCentury BCIQLINC02232
ClinGenLINC02232
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401134
Clinical trialLINC02232
Miscellaneous
canSAR (ICR)LINC02232 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02232
EVEXLINC02232
GoPubMedLINC02232
iHOPLINC02232
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:17 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.