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LINC02237 (long intergenic non-protein coding RNA 2237)

Identity

Alias_symbol (synonym)RP11-1101K5.1
Other alias-
HGNC (Hugo) LINC02237
LocusID (NCBI) 105375706
Atlas_Id 79620
Location 8q23.3  [Link to chromosome band 8q23]
Location_base_pair Starts at 111376639 and ends at 111470617 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02237   53108
Cards
Entrez_Gene (NCBI)LINC02237  105375706  long intergenic non-protein coding RNA 2237
Aliases
GeneCards (Weizmann)LINC02237
Ensembl hg19 (Hinxton)ENSG00000253434 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253434 [Gene_View]  chr8:111376639-111470617 [Contig_View]  LINC02237 [Vega]
ICGC DataPortalENSG00000253434
TCGA cBioPortalLINC02237
AceView (NCBI)LINC02237
Genatlas (Paris)LINC02237
WikiGenes105375706
SOURCE (Princeton)LINC02237
Genetics Home Reference (NIH)LINC02237
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02237  -     chr8:111376639-111470617 +  8q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02237  -     8q23.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02237 - 8q23.3 [CytoView hg19]  LINC02237 - 8q23.3 [CytoView hg38]
Mapping of homologs : NCBILINC02237 [Mapview hg19]  LINC02237 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA426376 BF701780 CB178463
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02237
Cluster EST : UnigeneHs.566832 [ NCBI ]
CGAP (NCI)Hs.566832
Alternative Splicing GalleryENSG00000253434
Gene ExpressionLINC02237 [ NCBI-GEO ]   LINC02237 [ EBI - ARRAY_EXPRESS ]   LINC02237 [ SEEK ]   LINC02237 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02237 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105375706
GTEX Portal (Tissue expression)LINC02237
Human Protein AtlasENSG00000253434-LINC02237 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02237
DMDM Disease mutations105375706
Blocks (Seattle)LINC02237
Human Protein Atlas [tissue]ENSG00000253434-LINC02237 [tissue]
Protein Interaction databases
FunCoupENSG00000253434
BioGRIDLINC02237
STRING (EMBL)LINC02237
ZODIACLINC02237
Ontologies - Pathways
Huge Navigator LINC02237 [HugePedia]
snp3D : Map Gene to Disease105375706
BioCentury BCIQLINC02237
ClinGenLINC02237
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105375706
Clinical trialLINC02237
Miscellaneous
canSAR (ICR)LINC02237 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02237
EVEXLINC02237
GoPubMedLINC02237
iHOPLINC02237
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:27 CET 2017

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