Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02242 (long intergenic non-protein coding RNA 2242)


Alias (NCBI)-
HGNC (Hugo) LINC02242
LocusID (NCBI) 105379006
Atlas_Id 79839
Location 5q13.1  [Link to chromosome band 5q13]
Location_base_pair Starts at 67632266 and ends at 67646789 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)LINC02242   53127
Entrez_Gene (NCBI)LINC02242    long intergenic non-protein coding RNA 2242
GeneCards (Weizmann)LINC02242
Ensembl hg19 (Hinxton)ENSG00000249736 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249736 [Gene_View]  ENSG00000249736 [Sequence]  chr5:67632266-67646789 [Contig_View]  LINC02242 [Vega]
ICGC DataPortalENSG00000249736
TCGA cBioPortalLINC02242
AceView (NCBI)LINC02242
Genatlas (Paris)LINC02242
SOURCE (Princeton)LINC02242
Genetics Home Reference (NIH)LINC02242
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02242  -     chr5:67632266-67646789 -  5q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02242  -     5q13.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC02242 - 5q13.1 [CytoView hg19]  LINC02242 - 5q13.1 [CytoView hg38]
Genome Data Viewer NCBILINC02242 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)CK430772
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02242
Gene ExpressionLINC02242 [ NCBI-GEO ]   LINC02242 [ EBI - ARRAY_EXPRESS ]   LINC02242 [ SEEK ]   LINC02242 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02242 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02242 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105379006
GTEX Portal (Tissue expression)LINC02242
Human Protein AtlasENSG00000249736-LINC02242 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02242
Human Protein Atlas [tissue]ENSG00000249736-LINC02242 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:02:58 CET 2022

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