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LINC02245 (long intergenic non-protein coding RNA 2245)

Identity

Alias_symbol (synonym)lnc-SERTAD2-3
AC007386.2
Other alias-
HGNC (Hugo) LINC02245
LocusID (NCBI) 400958
Atlas_Id 80253
Location 2p14  [Link to chromosome band 2p14]
Location_base_pair Starts at 64901840 and ends at 64932447 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02245   53134
Cards
Entrez_Gene (NCBI)LINC02245  400958  long intergenic non-protein coding RNA 2245
Aliases
GeneCards (Weizmann)LINC02245
Ensembl hg19 (Hinxton)ENSG00000237638 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237638 [Gene_View]  chr2:64901840-64932447 [Contig_View]  LINC02245 [Vega]
ICGC DataPortalENSG00000237638
TCGA cBioPortalLINC02245
AceView (NCBI)LINC02245
Genatlas (Paris)LINC02245
WikiGenes400958
SOURCE (Princeton)LINC02245
Genetics Home Reference (NIH)LINC02245
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02245  -     chr2:64901840-64932447 -  2p14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02245  -     2p14   [Description]    (hg19-Feb_2009)
EnsemblLINC02245 - 2p14 [CytoView hg19]  LINC02245 - 2p14 [CytoView hg38]
Mapping of homologs : NCBILINC02245 [Mapview hg19]  LINC02245 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037562
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02245
Cluster EST : UnigeneHs.591565 [ NCBI ]
CGAP (NCI)Hs.591565
Alternative Splicing GalleryENSG00000237638
Gene ExpressionLINC02245 [ NCBI-GEO ]   LINC02245 [ EBI - ARRAY_EXPRESS ]   LINC02245 [ SEEK ]   LINC02245 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02245 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400958
GTEX Portal (Tissue expression)LINC02245
Human Protein AtlasENSG00000237638-LINC02245 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02245
DMDM Disease mutations400958
Blocks (Seattle)LINC02245
Human Protein Atlas [tissue]ENSG00000237638-LINC02245 [tissue]
Protein Interaction databases
FunCoupENSG00000237638
BioGRIDLINC02245
STRING (EMBL)LINC02245
ZODIACLINC02245
Ontologies - Pathways
Huge Navigator LINC02245 [HugePedia]
snp3D : Map Gene to Disease400958
BioCentury BCIQLINC02245
ClinGenLINC02245
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400958
Clinical trialLINC02245
Miscellaneous
canSAR (ICR)LINC02245 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02245
EVEXLINC02245
GoPubMedLINC02245
iHOPLINC02245
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:20 CET 2017

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