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LINC02254 (long intergenic non-protein coding RNA 2254)

Identity

Other alias-
HGNC (Hugo) LINC02254
LocusID (NCBI) 101927286
Atlas_Id 79701
Location 15q26.2  [Link to chromosome band 15q26]
Location_base_pair Starts at 97370371 and ends at 97521811 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02254   53152
Cards
Entrez_Gene (NCBI)LINC02254  101927286  long intergenic non-protein coding RNA 2254
Aliases
GeneCards (Weizmann)LINC02254
Ensembl hg19 (Hinxton)ENSG00000259664 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259664 [Gene_View]  chr15:97370371-97521811 [Contig_View]  LINC02254 [Vega]
ICGC DataPortalENSG00000259664
TCGA cBioPortalLINC02254
AceView (NCBI)LINC02254
Genatlas (Paris)LINC02254
WikiGenes101927286
SOURCE (Princeton)LINC02254
Genetics Home Reference (NIH)LINC02254
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02254  -     chr15:97370371-97521811 -  15q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02254  -     15q26.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02254 - 15q26.2 [CytoView hg19]  LINC02254 - 15q26.2 [CytoView hg38]
Mapping of homologs : NCBILINC02254 [Mapview hg19]  LINC02254 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038379
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02254
Cluster EST : UnigeneHs.611279 [ NCBI ]
CGAP (NCI)Hs.611279
Alternative Splicing GalleryENSG00000259664
Gene ExpressionLINC02254 [ NCBI-GEO ]   LINC02254 [ EBI - ARRAY_EXPRESS ]   LINC02254 [ SEEK ]   LINC02254 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02254 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927286
GTEX Portal (Tissue expression)LINC02254
Human Protein AtlasENSG00000259664-LINC02254 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02254
DMDM Disease mutations101927286
Blocks (Seattle)LINC02254
Human Protein Atlas [tissue]ENSG00000259664-LINC02254 [tissue]
Protein Interaction databases
FunCoupENSG00000259664
BioGRIDLINC02254
STRING (EMBL)LINC02254
ZODIACLINC02254
Ontologies - Pathways
Huge Navigator LINC02254 [HugePedia]
snp3D : Map Gene to Disease101927286
BioCentury BCIQLINC02254
ClinGenLINC02254
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927286
Clinical trialLINC02254
Miscellaneous
canSAR (ICR)LINC02254 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02254
EVEXLINC02254
GoPubMedLINC02254
iHOPLINC02254
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:31:35 CET 2017

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