Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02257 (long intergenic non-protein coding RNA 2257)


Alias (NCBI)-
HGNC (Hugo) LINC02257
LocusID (NCBI) 105372950
Atlas_Id 80317
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 221913645 and ends at 221978520 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)LINC02257   53159
Entrez_Gene (NCBI)LINC02257    long intergenic non-protein coding RNA 2257
GeneCards (Weizmann)LINC02257
Ensembl hg19 (Hinxton)ENSG00000238042 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238042 [Gene_View]  ENSG00000238042 [Sequence]  chr1:221913645-221978520 [Contig_View]  LINC02257 [Vega]
ICGC DataPortalENSG00000238042
TCGA cBioPortalLINC02257
AceView (NCBI)LINC02257
Genatlas (Paris)LINC02257
SOURCE (Princeton)LINC02257
Genetics Home Reference (NIH)LINC02257
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02257  -     chr1:221913645-221978520 -  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02257  -     1q41   [Description]    (hg19-Feb_2009)
GoldenPathLINC02257 - 1q41 [CytoView hg19]  LINC02257 - 1q41 [CytoView hg38]
genome Data Viewer NCBILINC02257 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA564450 BX114699
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02257
Alternative Splicing GalleryENSG00000238042
Gene ExpressionLINC02257 [ NCBI-GEO ]   LINC02257 [ EBI - ARRAY_EXPRESS ]   LINC02257 [ SEEK ]   LINC02257 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02257 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02257 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105372950
GTEX Portal (Tissue expression)LINC02257
Human Protein AtlasENSG00000238042-LINC02257 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02257
Blocks (Seattle)LINC02257
Human Protein Atlas [tissue]ENSG00000238042-LINC02257 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:04:35 CET 2020

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