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LINC02260 (long intergenic non-protein coding RNA 2260)

Identity

Other alias-
HGNC (Hugo) LINC02260
LocusID (NCBI) 339978
Atlas_Id 80084
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 54603211 and ends at 54607131 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02260   27956
Cards
Entrez_Gene (NCBI)LINC02260  339978  long intergenic non-protein coding RNA 2260
Aliases
GeneCards (Weizmann)LINC02260
Ensembl hg19 (Hinxton)ENSG00000250456 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250456 [Gene_View]  ENSG00000250456 [Sequence]  chr4:54603211-54607131 [Contig_View]  LINC02260 [Vega]
ICGC DataPortalENSG00000250456
TCGA cBioPortalLINC02260
AceView (NCBI)LINC02260
Genatlas (Paris)LINC02260
WikiGenes339978
SOURCE (Princeton)LINC02260
Genetics Home Reference (NIH)LINC02260
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02260  -     chr4:54603211-54607131 -  4q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02260  -     4q12   [Description]    (hg19-Feb_2009)
EnsemblLINC02260 - 4q12 [CytoView hg19]  LINC02260 - 4q12 [CytoView hg38]
Mapping of homologs : NCBILINC02260 [Mapview hg19]  LINC02260 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043566 BC044946
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02260
Alternative Splicing GalleryENSG00000250456
Gene ExpressionLINC02260 [ NCBI-GEO ]   LINC02260 [ EBI - ARRAY_EXPRESS ]   LINC02260 [ SEEK ]   LINC02260 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02260 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339978
GTEX Portal (Tissue expression)LINC02260
Human Protein AtlasENSG00000250456-LINC02260 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02260
DMDM Disease mutations339978
Blocks (Seattle)LINC02260
Human Protein Atlas [tissue]ENSG00000250456-LINC02260 [tissue]
Protein Interaction databases
FunCoupENSG00000250456
BioGRIDLINC02260
STRING (EMBL)LINC02260
ZODIACLINC02260
Ontologies - Pathways
Huge Navigator LINC02260 [HugePedia]
snp3D : Map Gene to Disease339978
BioCentury BCIQLINC02260
ClinGenLINC02260
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339978
Clinical trialLINC02260
Miscellaneous
canSAR (ICR)LINC02260 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02260
EVEXLINC02260
GoPubMedLINC02260
iHOPLINC02260
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:22 CEST 2018

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