Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02270 (long intergenic non-protein coding RNA 2270)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02270
LocusID (NCBI) 101929019
Atlas_Id 79795
Location 4p15.33  [Link to chromosome band 4p15]
Location_base_pair Starts at 12223451 and ends at 12251285 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC02270   53185
Cards
Entrez_Gene (NCBI)LINC02270    long intergenic non-protein coding RNA 2270
Aliases
GeneCards (Weizmann)LINC02270
Ensembl hg19 (Hinxton)ENSG00000251210 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251210 [Gene_View]  ENSG00000251210 [Sequence]  chr4:12223451-12251285 [Contig_View]  LINC02270 [Vega]
ICGC DataPortalENSG00000251210
TCGA cBioPortalLINC02270
AceView (NCBI)LINC02270
Genatlas (Paris)LINC02270
SOURCE (Princeton)LINC02270
Genetics Home Reference (NIH)LINC02270
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02270  -     chr4:12223451-12251285 +  4p15.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02270  -     4p15.33   [Description]    (hg19-Feb_2009)
GoldenPathLINC02270 - 4p15.33 [CytoView hg19]  LINC02270 - 4p15.33 [CytoView hg38]
ImmunoBaseENSG00000251210
genome Data Viewer NCBILINC02270 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC042433 BQ441613
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02270
Alternative Splicing GalleryENSG00000251210
Gene ExpressionLINC02270 [ NCBI-GEO ]   LINC02270 [ EBI - ARRAY_EXPRESS ]   LINC02270 [ SEEK ]   LINC02270 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02270 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02270 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929019
GTEX Portal (Tissue expression)LINC02270
Human Protein AtlasENSG00000251210-LINC02270 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02270
Blocks (Seattle)LINC02270
Human Protein Atlas [tissue]ENSG00000251210-LINC02270 [tissue]
Protein Interaction databases
BioGRIDLINC02270
STRING (EMBL)LINC02270
ZODIACLINC02270
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02270
EVEXLINC02270
GoPubMedLINC02270
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:04:38 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.