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LINC02271 (long intergenic non-protein coding RNA 2271)

Identity

Other alias-
HGNC (Hugo) LINC02271
LocusID (NCBI) 105377249
Atlas_Id 78987
Location 4q13.1  [Link to chromosome band 4q13]
Location_base_pair Starts at 61143656 and ends at 61153651 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02271   53186
Cards
Entrez_Gene (NCBI)LINC02271  105377249  long intergenic non-protein coding RNA 2271
Aliases
GeneCards (Weizmann)LINC02271
Ensembl hg19 (Hinxton)ENSG00000240152 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240152 [Gene_View]  ENSG00000240152 [Sequence]  chr4:61143656-61153651 [Contig_View]  LINC02271 [Vega]
ICGC DataPortalENSG00000240152
TCGA cBioPortalLINC02271
AceView (NCBI)LINC02271
Genatlas (Paris)LINC02271
WikiGenes105377249
SOURCE (Princeton)LINC02271
Genetics Home Reference (NIH)LINC02271
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02271  -     chr4:61143656-61153651 +  4q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02271  -     4q13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02271 - 4q13.1 [CytoView hg19]  LINC02271 - 4q13.1 [CytoView hg38]
Mapping of homologs : NCBILINC02271 [Mapview hg19]  LINC02271 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB025445 DB033593
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02271
Cluster EST : UnigeneHs.575120 [ NCBI ]
CGAP (NCI)Hs.575120
Alternative Splicing GalleryENSG00000240152
Gene ExpressionLINC02271 [ NCBI-GEO ]   LINC02271 [ EBI - ARRAY_EXPRESS ]   LINC02271 [ SEEK ]   LINC02271 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02271 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377249
GTEX Portal (Tissue expression)LINC02271
Human Protein AtlasENSG00000240152-LINC02271 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02271
DMDM Disease mutations105377249
Blocks (Seattle)LINC02271
Human Protein Atlas [tissue]ENSG00000240152-LINC02271 [tissue]
Protein Interaction databases
FunCoupENSG00000240152
BioGRIDLINC02271
STRING (EMBL)LINC02271
ZODIACLINC02271
Ontologies - Pathways
Huge Navigator LINC02271 [HugePedia]
snp3D : Map Gene to Disease105377249
BioCentury BCIQLINC02271
ClinGenLINC02271
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377249
Clinical trialLINC02271
Miscellaneous
canSAR (ICR)LINC02271 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02271
EVEXLINC02271
GoPubMedLINC02271
iHOPLINC02271
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:24 CEST 2018

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