Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02273 (long intergenic non-protein coding RNA 2273)

Identity

Other alias-
HGNC (Hugo) LINC02273
LocusID (NCBI) 100996286
Atlas_Id 79568
Location 4q31.3  [Link to chromosome band 4q31]
Location_base_pair Starts at 152100818 and ends at 152104716 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02273   53188
Cards
Entrez_Gene (NCBI)LINC02273  100996286  long intergenic non-protein coding RNA 2273
Aliases
GeneCards (Weizmann)LINC02273
Ensembl hg19 (Hinxton)ENSG00000245954 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245954 [Gene_View]  ENSG00000245954 [Sequence]  chr4:152100818-152104716 [Contig_View]  LINC02273 [Vega]
ICGC DataPortalENSG00000245954
TCGA cBioPortalLINC02273
AceView (NCBI)LINC02273
Genatlas (Paris)LINC02273
WikiGenes100996286
SOURCE (Princeton)LINC02273
Genetics Home Reference (NIH)LINC02273
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02273  -     chr4:152100818-152104716 +  4q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02273  -     4q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02273 - 4q31.3 [CytoView hg19]  LINC02273 - 4q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC02273 [Mapview hg19]  LINC02273 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040914 BU617226 CB986668
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02273
Cluster EST : UnigeneHs.322462 [ NCBI ]
CGAP (NCI)Hs.322462
Alternative Splicing GalleryENSG00000245954
Gene ExpressionLINC02273 [ NCBI-GEO ]   LINC02273 [ EBI - ARRAY_EXPRESS ]   LINC02273 [ SEEK ]   LINC02273 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02273 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996286
GTEX Portal (Tissue expression)LINC02273
Human Protein AtlasENSG00000245954-LINC02273 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02273
DMDM Disease mutations100996286
Blocks (Seattle)LINC02273
Human Protein Atlas [tissue]ENSG00000245954-LINC02273 [tissue]
Protein Interaction databases
FunCoupENSG00000245954
BioGRIDLINC02273
STRING (EMBL)LINC02273
ZODIACLINC02273
Ontologies - Pathways
Huge Navigator LINC02273 [HugePedia]
snp3D : Map Gene to Disease100996286
BioCentury BCIQLINC02273
ClinGenLINC02273
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996286
Clinical trialLINC02273
Miscellaneous
canSAR (ICR)LINC02273 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02273
EVEXLINC02273
GoPubMedLINC02273
iHOPLINC02273
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:25 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.