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LINC02275 (long intergenic non-protein coding RNA 2275)

Identity

Other alias-
HGNC (Hugo) LINC02275
LocusID (NCBI) 100506085
Atlas_Id 79920
Location 4q33  [Link to chromosome band 4q33]
Location_base_pair Starts at 169917761 and ends at 169975902 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02275   53191
Cards
Entrez_Gene (NCBI)LINC02275  100506085  long intergenic non-protein coding RNA 2275
Aliases
GeneCards (Weizmann)LINC02275
Ensembl hg19 (Hinxton)ENSG00000248319 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248319 [Gene_View]  ENSG00000248319 [Sequence]  chr4:169917761-169975902 [Contig_View]  LINC02275 [Vega]
ICGC DataPortalENSG00000248319
TCGA cBioPortalLINC02275
AceView (NCBI)LINC02275
Genatlas (Paris)LINC02275
WikiGenes100506085
SOURCE (Princeton)LINC02275
Genetics Home Reference (NIH)LINC02275
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02275  -     chr4:169917761-169975902 -  4q33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02275  -     4q33   [Description]    (hg19-Feb_2009)
EnsemblLINC02275 - 4q33 [CytoView hg19]  LINC02275 - 4q33 [CytoView hg38]
Mapping of homologs : NCBILINC02275 [Mapview hg19]  LINC02275 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125042
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02275
Cluster EST : UnigeneHs.649173 [ NCBI ]
CGAP (NCI)Hs.649173
Alternative Splicing GalleryENSG00000248319
Gene ExpressionLINC02275 [ NCBI-GEO ]   LINC02275 [ EBI - ARRAY_EXPRESS ]   LINC02275 [ SEEK ]   LINC02275 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02275 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506085
GTEX Portal (Tissue expression)LINC02275
Human Protein AtlasENSG00000248319-LINC02275 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02275
DMDM Disease mutations100506085
Blocks (Seattle)LINC02275
Human Protein Atlas [tissue]ENSG00000248319-LINC02275 [tissue]
Protein Interaction databases
FunCoupENSG00000248319
BioGRIDLINC02275
STRING (EMBL)LINC02275
ZODIACLINC02275
Ontologies - Pathways
Huge Navigator LINC02275 [HugePedia]
snp3D : Map Gene to Disease100506085
BioCentury BCIQLINC02275
ClinGenLINC02275
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506085
Clinical trialLINC02275
Miscellaneous
canSAR (ICR)LINC02275 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02275
EVEXLINC02275
GoPubMedLINC02275
iHOPLINC02275
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:25 CEST 2018

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