Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02280 (long intergenic non-protein coding RNA 2280)

Identity

Other alias-
HGNC (Hugo) LINC02280
LocusID (NCBI) 101929634
Atlas_Id 78981
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 104661120 and ends at 104665558 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02280   53196
Cards
Entrez_Gene (NCBI)LINC02280  101929634  long intergenic non-protein coding RNA 2280
Aliases
GeneCards (Weizmann)LINC02280
Ensembl hg19 (Hinxton)ENSG00000260792 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260792 [Gene_View]  chr14:104661120-104665558 [Contig_View]  LINC02280 [Vega]
ICGC DataPortalENSG00000260792
TCGA cBioPortalLINC02280
AceView (NCBI)LINC02280
Genatlas (Paris)LINC02280
WikiGenes101929634
SOURCE (Princeton)LINC02280
Genetics Home Reference (NIH)LINC02280
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02280  -     chr14:104661120-104665558 -  14q32.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02280  -     14q32.33   [Description]    (hg19-Feb_2009)
EnsemblLINC02280 - 14q32.33 [CytoView hg19]  LINC02280 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBILINC02280 [Mapview hg19]  LINC02280 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128797
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02280
Cluster EST : UnigeneHs.532502 [ NCBI ]
CGAP (NCI)Hs.532502
Alternative Splicing GalleryENSG00000260792
Gene ExpressionLINC02280 [ NCBI-GEO ]   LINC02280 [ EBI - ARRAY_EXPRESS ]   LINC02280 [ SEEK ]   LINC02280 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02280 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929634
GTEX Portal (Tissue expression)LINC02280
Human Protein AtlasENSG00000260792-LINC02280 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02280
DMDM Disease mutations101929634
Blocks (Seattle)LINC02280
Human Protein Atlas [tissue]ENSG00000260792-LINC02280 [tissue]
Protein Interaction databases
FunCoupENSG00000260792
BioGRIDLINC02280
STRING (EMBL)LINC02280
ZODIACLINC02280
Ontologies - Pathways
Huge Navigator LINC02280 [HugePedia]
snp3D : Map Gene to Disease101929634
BioCentury BCIQLINC02280
ClinGenLINC02280
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929634
Clinical trialLINC02280
Miscellaneous
canSAR (ICR)LINC02280 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02280
EVEXLINC02280
GoPubMedLINC02280
iHOPLINC02280
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:29:49 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.