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LINC02283 (long intergenic non-protein coding RNA 2283)

Identity

Other alias-
HGNC (Hugo) LINC02283
LocusID (NCBI) 105377656
Atlas_Id 79772
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 54332892 and ends at 54356104 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02283   53200
Cards
Entrez_Gene (NCBI)LINC02283  105377656  long intergenic non-protein coding RNA 2283
Aliases
GeneCards (Weizmann)LINC02283
Ensembl hg19 (Hinxton)ENSG00000248184 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248184 [Gene_View]  ENSG00000248184 [Sequence]  chr4:54332892-54356104 [Contig_View]  LINC02283 [Vega]
ICGC DataPortalENSG00000248184
TCGA cBioPortalLINC02283
AceView (NCBI)LINC02283
Genatlas (Paris)LINC02283
WikiGenes105377656
SOURCE (Princeton)LINC02283
Genetics Home Reference (NIH)LINC02283
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02283  -     chr4:54332892-54356104 +  4q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02283  -     4q12   [Description]    (hg19-Feb_2009)
EnsemblLINC02283 - 4q12 [CytoView hg19]  LINC02283 - 4q12 [CytoView hg38]
Mapping of homologs : NCBILINC02283 [Mapview hg19]  LINC02283 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX114935 CA433628
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02283
Cluster EST : UnigeneHs.738157 [ NCBI ]
CGAP (NCI)Hs.738157
Alternative Splicing GalleryENSG00000248184
Gene ExpressionLINC02283 [ NCBI-GEO ]   LINC02283 [ EBI - ARRAY_EXPRESS ]   LINC02283 [ SEEK ]   LINC02283 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02283 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377656
GTEX Portal (Tissue expression)LINC02283
Human Protein AtlasENSG00000248184-LINC02283 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02283
DMDM Disease mutations105377656
Blocks (Seattle)LINC02283
Human Protein Atlas [tissue]ENSG00000248184-LINC02283 [tissue]
Protein Interaction databases
FunCoupENSG00000248184
BioGRIDLINC02283
STRING (EMBL)LINC02283
ZODIACLINC02283
Ontologies - Pathways
Huge Navigator LINC02283 [HugePedia]
snp3D : Map Gene to Disease105377656
BioCentury BCIQLINC02283
ClinGenLINC02283
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377656
Clinical trialLINC02283
Miscellaneous
canSAR (ICR)LINC02283 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02283
EVEXLINC02283
GoPubMedLINC02283
iHOPLINC02283
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:26 CEST 2018

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