Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02308 (long intergenic non-protein coding RNA 2308)

Identity

Other alias-
HGNC (Hugo) LINC02308
LocusID (NCBI) 100506700
Atlas_Id 80150
Location 14q31.1  [Link to chromosome band 14q31]
Location_base_pair Starts at 81441987 and ends at 81450157 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02308   53227
Cards
Entrez_Gene (NCBI)LINC02308  100506700  long intergenic non-protein coding RNA 2308
Aliases
GeneCards (Weizmann)LINC02308
Ensembl hg19 (Hinxton)ENSG00000258675 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258675 [Gene_View]  chr14:81441987-81450157 [Contig_View]  LINC02308 [Vega]
ICGC DataPortalENSG00000258675
TCGA cBioPortalLINC02308
AceView (NCBI)LINC02308
Genatlas (Paris)LINC02308
WikiGenes100506700
SOURCE (Princeton)LINC02308
Genetics Home Reference (NIH)LINC02308
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02308  -     chr14:81441987-81450157 -  14q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02308  -     14q31.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02308 - 14q31.1 [CytoView hg19]  LINC02308 - 14q31.1 [CytoView hg38]
Mapping of homologs : NCBILINC02308 [Mapview hg19]  LINC02308 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA629110 AI078294 CR743158
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02308
Cluster EST : UnigeneHs.116304 [ NCBI ]
CGAP (NCI)Hs.116304
Alternative Splicing GalleryENSG00000258675
Gene ExpressionLINC02308 [ NCBI-GEO ]   LINC02308 [ EBI - ARRAY_EXPRESS ]   LINC02308 [ SEEK ]   LINC02308 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02308 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506700
GTEX Portal (Tissue expression)LINC02308
Human Protein AtlasENSG00000258675-LINC02308 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02308
DMDM Disease mutations100506700
Blocks (Seattle)LINC02308
Human Protein Atlas [tissue]ENSG00000258675-LINC02308 [tissue]
Protein Interaction databases
FunCoupENSG00000258675
BioGRIDLINC02308
STRING (EMBL)LINC02308
ZODIACLINC02308
Ontologies - Pathways
Huge Navigator LINC02308 [HugePedia]
snp3D : Map Gene to Disease100506700
BioCentury BCIQLINC02308
ClinGenLINC02308
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506700
Clinical trialLINC02308
Miscellaneous
canSAR (ICR)LINC02308 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02308
EVEXLINC02308
GoPubMedLINC02308
iHOPLINC02308
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:29:52 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.