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LINC02330 (long intergenic non-protein coding RNA 2330)

Identity

Other alias-
HGNC (Hugo) LINC02330
LocusID (NCBI) 105370611
Atlas_Id 80157
Location 14q31.3  [Link to chromosome band 14q31]
Location_base_pair Starts at 87634379 and ends at 87655294 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02330   53250
Cards
Entrez_Gene (NCBI)LINC02330  105370611  long intergenic non-protein coding RNA 2330
Aliases
GeneCards (Weizmann)LINC02330
Ensembl hg19 (Hinxton)ENSG00000258770 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258770 [Gene_View]  chr14:87634379-87655294 [Contig_View]  LINC02330 [Vega]
ICGC DataPortalENSG00000258770
TCGA cBioPortalLINC02330
AceView (NCBI)LINC02330
Genatlas (Paris)LINC02330
WikiGenes105370611
SOURCE (Princeton)LINC02330
Genetics Home Reference (NIH)LINC02330
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02330  -     chr14:87634379-87655294 -  14q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02330  -     14q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02330 - 14q31.3 [CytoView hg19]  LINC02330 - 14q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC02330 [Mapview hg19]  LINC02330 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB048201
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02330
Cluster EST : UnigeneHs.691123 [ NCBI ]
CGAP (NCI)Hs.691123
Alternative Splicing GalleryENSG00000258770
Gene ExpressionLINC02330 [ NCBI-GEO ]   LINC02330 [ EBI - ARRAY_EXPRESS ]   LINC02330 [ SEEK ]   LINC02330 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02330 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105370611
GTEX Portal (Tissue expression)LINC02330
Human Protein AtlasENSG00000258770-LINC02330 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02330
DMDM Disease mutations105370611
Blocks (Seattle)LINC02330
Human Protein Atlas [tissue]ENSG00000258770-LINC02330 [tissue]
Protein Interaction databases
FunCoupENSG00000258770
BioGRIDLINC02330
STRING (EMBL)LINC02330
ZODIACLINC02330
Ontologies - Pathways
Huge Navigator LINC02330 [HugePedia]
snp3D : Map Gene to Disease105370611
BioCentury BCIQLINC02330
ClinGenLINC02330
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105370611
Clinical trialLINC02330
Miscellaneous
canSAR (ICR)LINC02330 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02330
EVEXLINC02330
GoPubMedLINC02330
iHOPLINC02330
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:29:55 CET 2017

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