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LINC02344 (long intergenic non-protein coding RNA 2344)

Identity

Other alias-
HGNC (Hugo) LINC02344
LocusID (NCBI) 105370154
Atlas_Id 79102
Location 13q13.1  [Link to chromosome band 13q13]
Location_base_pair Starts at 33333846 and ends at 33335266 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02344   53264
Cards
Entrez_Gene (NCBI)LINC02344  105370154  long intergenic non-protein coding RNA 2344
Aliases
GeneCards (Weizmann)LINC02344
Ensembl hg19 (Hinxton)ENSG00000227911 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227911 [Gene_View]  chr13:33333846-33335266 [Contig_View]  LINC02344 [Vega]
ICGC DataPortalENSG00000227911
TCGA cBioPortalLINC02344
AceView (NCBI)LINC02344
Genatlas (Paris)LINC02344
WikiGenes105370154
SOURCE (Princeton)LINC02344
Genetics Home Reference (NIH)LINC02344
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02344  -     chr13:33333846-33335266 -  13q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02344  -     13q13.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02344 - 13q13.1 [CytoView hg19]  LINC02344 - 13q13.1 [CytoView hg38]
Mapping of homologs : NCBILINC02344 [Mapview hg19]  LINC02344 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02344
Alternative Splicing GalleryENSG00000227911
Gene ExpressionLINC02344 [ NCBI-GEO ]   LINC02344 [ EBI - ARRAY_EXPRESS ]   LINC02344 [ SEEK ]   LINC02344 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02344 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105370154
GTEX Portal (Tissue expression)LINC02344
Human Protein AtlasENSG00000227911-LINC02344 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02344
DMDM Disease mutations105370154
Blocks (Seattle)LINC02344
Human Protein Atlas [tissue]ENSG00000227911-LINC02344 [tissue]
Protein Interaction databases
FunCoupENSG00000227911
BioGRIDLINC02344
STRING (EMBL)LINC02344
ZODIACLINC02344
Ontologies - Pathways
Huge Navigator LINC02344 [HugePedia]
snp3D : Map Gene to Disease105370154
BioCentury BCIQLINC02344
ClinGenLINC02344
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105370154
Clinical trialLINC02344
Miscellaneous
canSAR (ICR)LINC02344 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02344
EVEXLINC02344
GoPubMedLINC02344
iHOPLINC02344
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:33 CET 2017

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