Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02345 (long intergenic non-protein coding RNA 2345)

Identity

Other alias-
HGNC (Hugo) LINC02345
LocusID (NCBI) 101928227
Atlas_Id 80242
Location 15q14  [Link to chromosome band 15q14]
Location_base_pair Starts at 38040393 and ends at 38062340 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02345   53267
Cards
Entrez_Gene (NCBI)LINC02345  101928227  long intergenic non-protein coding RNA 2345
Aliases
GeneCards (Weizmann)LINC02345
Ensembl hg19 (Hinxton)ENSG00000259225 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259225 [Gene_View]  chr15:38040393-38062340 [Contig_View]  LINC02345 [Vega]
ICGC DataPortalENSG00000259225
TCGA cBioPortalLINC02345
AceView (NCBI)LINC02345
Genatlas (Paris)LINC02345
WikiGenes101928227
SOURCE (Princeton)LINC02345
Genetics Home Reference (NIH)LINC02345
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02345  -     chr15:38040393-38062340 +  15q14   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02345  -     15q14   [Description]    (hg19-Feb_2009)
EnsemblLINC02345 - 15q14 [CytoView hg19]  LINC02345 - 15q14 [CytoView hg38]
Mapping of homologs : NCBILINC02345 [Mapview hg19]  LINC02345 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA934880
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02345
Cluster EST : UnigeneHs.602381 [ NCBI ]
CGAP (NCI)Hs.602381
Alternative Splicing GalleryENSG00000259225
Gene ExpressionLINC02345 [ NCBI-GEO ]   LINC02345 [ EBI - ARRAY_EXPRESS ]   LINC02345 [ SEEK ]   LINC02345 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02345 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928227
GTEX Portal (Tissue expression)LINC02345
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02345
DMDM Disease mutations101928227
Blocks (Seattle)LINC02345
Human Protein AtlasENSG00000259225
Protein Interaction databases
FunCoupENSG00000259225
BioGRIDLINC02345
STRING (EMBL)LINC02345
ZODIACLINC02345
Ontologies - Pathways
Huge Navigator LINC02345 [HugePedia]
snp3D : Map Gene to Disease101928227
BioCentury BCIQLINC02345
ClinGenLINC02345
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928227
Clinical trialLINC02345
Miscellaneous
canSAR (ICR)LINC02345 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02345
EVEXLINC02345
GoPubMedLINC02345
iHOPLINC02345
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:16:18 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.