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LINC02348 (long intergenic non-protein coding RNA 2348)

Identity

Alias (NCBI)-
HGNC (Hugo) LINC02348
LocusID (NCBI) 101927505
Atlas_Id 78907
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 101602786 and ends at 101614339 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02348   53270
Cards
Entrez_Gene (NCBI)LINC02348  101927505  long intergenic non-protein coding RNA 2348
Aliases
GeneCards (Weizmann)LINC02348
Ensembl hg19 (Hinxton)ENSG00000286733 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000286733 [Gene_View]  ENSG00000286733 [Sequence]  chr15:101602786-101614339 [Contig_View]  LINC02348 [Vega]
ICGC DataPortalENSG00000286733
TCGA cBioPortalLINC02348
AceView (NCBI)LINC02348
Genatlas (Paris)LINC02348
WikiGenes101927505
SOURCE (Princeton)LINC02348
Genetics Home Reference (NIH)LINC02348
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02348  -     chr15:101602786-101614339 -  15q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02348  -     15q26.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC02348 - 15q26.3 [CytoView hg19]  LINC02348 - 15q26.3 [CytoView hg38]
ImmunoBaseENSG00000286733
genome Data Viewer NCBILINC02348 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DA384874
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02348
Alternative Splicing GalleryENSG00000286733
Gene ExpressionLINC02348 [ NCBI-GEO ]   LINC02348 [ EBI - ARRAY_EXPRESS ]   LINC02348 [ SEEK ]   LINC02348 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02348 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02348 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927505
GTEX Portal (Tissue expression)LINC02348
Human Protein AtlasENSG00000286733-LINC02348 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02348
DMDM Disease mutations101927505
Blocks (Seattle)LINC02348
Human Protein Atlas [tissue]ENSG00000286733-LINC02348 [tissue]
Protein Interaction databases
FunCoupENSG00000286733
BioGRIDLINC02348
STRING (EMBL)LINC02348
ZODIACLINC02348
Ontologies - Pathways
Huge Navigator LINC02348 [HugePedia]
snp3D : Map Gene to Disease101927505
BioCentury BCIQLINC02348
ClinGenLINC02348
Clinical trials, drugs, therapy
Protein Interactions : CTD101927505
Clinical trialLINC02348
Miscellaneous
canSAR (ICR)LINC02348 (select the gene name)
HarmonizomeLINC02348
DataMed IndexLINC02348
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02348
EVEXLINC02348
GoPubMedLINC02348
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:05:38 CEST 2020

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