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LINC02353 (long intergenic non-protein coding RNA 2353)

Identity

Other alias-
HGNC (Hugo) LINC02353
LocusID (NCBI) 101927363
Atlas_Id 79622
Location 4p15.1  [Link to chromosome band 4p15]
Location_base_pair Starts at 32351038 and ends at 32353220 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02353   53275
Cards
Entrez_Gene (NCBI)LINC02353  101927363  long intergenic non-protein coding RNA 2353
Aliases
GeneCards (Weizmann)LINC02353
Ensembl hg19 (Hinxton)ENSG00000251329 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251329 [Gene_View]  ENSG00000251329 [Sequence]  chr4:32351038-32353220 [Contig_View]  LINC02353 [Vega]
ICGC DataPortalENSG00000251329
TCGA cBioPortalLINC02353
AceView (NCBI)LINC02353
Genatlas (Paris)LINC02353
WikiGenes101927363
SOURCE (Princeton)LINC02353
Genetics Home Reference (NIH)LINC02353
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02353  -     chr4:32351038-32353220 +  4p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02353  -     4p15.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02353 - 4p15.1 [CytoView hg19]  LINC02353 - 4p15.1 [CytoView hg38]
Mapping of homologs : NCBILINC02353 [Mapview hg19]  LINC02353 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043520
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02353
Cluster EST : UnigeneHs.559406 [ NCBI ]
CGAP (NCI)Hs.559406
Alternative Splicing GalleryENSG00000251329
Gene ExpressionLINC02353 [ NCBI-GEO ]   LINC02353 [ EBI - ARRAY_EXPRESS ]   LINC02353 [ SEEK ]   LINC02353 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02353 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927363
GTEX Portal (Tissue expression)LINC02353
Human Protein AtlasENSG00000251329-LINC02353 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02353
DMDM Disease mutations101927363
Blocks (Seattle)LINC02353
Human Protein Atlas [tissue]ENSG00000251329-LINC02353 [tissue]
Protein Interaction databases
FunCoupENSG00000251329
BioGRIDLINC02353
STRING (EMBL)LINC02353
ZODIACLINC02353
Ontologies - Pathways
Huge Navigator LINC02353 [HugePedia]
snp3D : Map Gene to Disease101927363
BioCentury BCIQLINC02353
ClinGenLINC02353
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927363
Clinical trialLINC02353
Miscellaneous
canSAR (ICR)LINC02353 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02353
EVEXLINC02353
GoPubMedLINC02353
iHOPLINC02353
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:36 CEST 2018

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