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LINC02365 (long intergenic non-protein coding RNA 2365)

Identity

Alias_symbol (synonym)LVCAT8
Other alias
HGNC (Hugo) LINC02365
LocusID (NCBI) 105377586
Atlas_Id 80041
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 184618616 and ends at 184624872 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02365   53285
Cards
Entrez_Gene (NCBI)LINC02365  105377586  long intergenic non-protein coding RNA 2365
AliasesLVCAT8
GeneCards (Weizmann)LINC02365
Ensembl hg19 (Hinxton)ENSG00000254233 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254233 [Gene_View]  ENSG00000254233 [Sequence]  chr4:184618616-184624872 [Contig_View]  LINC02365 [Vega]
ICGC DataPortalENSG00000254233
TCGA cBioPortalLINC02365
AceView (NCBI)LINC02365
Genatlas (Paris)LINC02365
WikiGenes105377586
SOURCE (Princeton)LINC02365
Genetics Home Reference (NIH)LINC02365
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02365  -     chr4:184618616-184624872 -  4q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02365  -     4q35.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02365 - 4q35.1 [CytoView hg19]  LINC02365 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBILINC02365 [Mapview hg19]  LINC02365 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX445795 CB047685 CB047686
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02365
Cluster EST : UnigeneHs.338354 [ NCBI ]
CGAP (NCI)Hs.338354
Alternative Splicing GalleryENSG00000254233
Gene ExpressionLINC02365 [ NCBI-GEO ]   LINC02365 [ EBI - ARRAY_EXPRESS ]   LINC02365 [ SEEK ]   LINC02365 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02365 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377586
GTEX Portal (Tissue expression)LINC02365
Human Protein AtlasENSG00000254233-LINC02365 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02365
DMDM Disease mutations105377586
Blocks (Seattle)LINC02365
Human Protein Atlas [tissue]ENSG00000254233-LINC02365 [tissue]
Protein Interaction databases
FunCoupENSG00000254233
BioGRIDLINC02365
STRING (EMBL)LINC02365
ZODIACLINC02365
Ontologies - Pathways
Huge Navigator LINC02365 [HugePedia]
snp3D : Map Gene to Disease105377586
BioCentury BCIQLINC02365
ClinGenLINC02365
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377586
Clinical trialLINC02365
Miscellaneous
canSAR (ICR)LINC02365 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02365
EVEXLINC02365
GoPubMedLINC02365
iHOPLINC02365
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:38 CEST 2018

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