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LINC02382 (long intergenic non-protein coding RNA 2382)

Identity

Other alias-
HGNC (Hugo) LINC02382
LocusID (NCBI) 100506107
Atlas_Id 79481
Location 4q33  [Link to chromosome band 4q33]
Location_base_pair Starts at 170742469 and ends at 170743735 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02382   53305
Cards
Entrez_Gene (NCBI)LINC02382  100506107  long intergenic non-protein coding RNA 2382
Aliases
GeneCards (Weizmann)LINC02382
Ensembl hg19 (Hinxton)ENSG00000250968 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250968 [Gene_View]  ENSG00000250968 [Sequence]  chr4:170742469-170743735 [Contig_View]  LINC02382 [Vega]
ICGC DataPortalENSG00000250968
TCGA cBioPortalLINC02382
AceView (NCBI)LINC02382
Genatlas (Paris)LINC02382
WikiGenes100506107
SOURCE (Princeton)LINC02382
Genetics Home Reference (NIH)LINC02382
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02382  -     chr4:170742469-170743735 -  4q33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02382  -     4q33   [Description]    (hg19-Feb_2009)
EnsemblLINC02382 - 4q33 [CytoView hg19]  LINC02382 - 4q33 [CytoView hg38]
Mapping of homologs : NCBILINC02382 [Mapview hg19]  LINC02382 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086144 BU078148
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02382
Cluster EST : UnigeneHs.380602 [ NCBI ]
CGAP (NCI)Hs.380602
Alternative Splicing GalleryENSG00000250968
Gene ExpressionLINC02382 [ NCBI-GEO ]   LINC02382 [ EBI - ARRAY_EXPRESS ]   LINC02382 [ SEEK ]   LINC02382 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02382 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506107
GTEX Portal (Tissue expression)LINC02382
Human Protein AtlasENSG00000250968-LINC02382 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02382
DMDM Disease mutations100506107
Blocks (Seattle)LINC02382
Human Protein Atlas [tissue]ENSG00000250968-LINC02382 [tissue]
Protein Interaction databases
FunCoupENSG00000250968
BioGRIDLINC02382
STRING (EMBL)LINC02382
ZODIACLINC02382
Ontologies - Pathways
Huge Navigator LINC02382 [HugePedia]
snp3D : Map Gene to Disease100506107
BioCentury BCIQLINC02382
ClinGenLINC02382
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506107
Clinical trialLINC02382
Miscellaneous
canSAR (ICR)LINC02382 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02382
EVEXLINC02382
GoPubMedLINC02382
iHOPLINC02382
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:41 CEST 2018

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