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LINC02383 (long intergenic non-protein coding RNA 2383)

Identity

Other alias-
HGNC (Hugo) LINC02383
LocusID (NCBI) 105374436
Atlas_Id 79850
Location 4p13  [Link to chromosome band 4p13]
Location_base_pair Starts at 43457536 and ends at 43492543 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02383   53306
Cards
Entrez_Gene (NCBI)LINC02383  105374436  long intergenic non-protein coding RNA 2383
Aliases
GeneCards (Weizmann)LINC02383
Ensembl hg19 (Hinxton)ENSG00000248143 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248143 [Gene_View]  ENSG00000248143 [Sequence]  chr4:43457536-43492543 [Contig_View]  LINC02383 [Vega]
ICGC DataPortalENSG00000248143
TCGA cBioPortalLINC02383
AceView (NCBI)LINC02383
Genatlas (Paris)LINC02383
WikiGenes105374436
SOURCE (Princeton)LINC02383
Genetics Home Reference (NIH)LINC02383
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02383  -     chr4:43457536-43492543 -  4p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02383  -     4p13   [Description]    (hg19-Feb_2009)
EnsemblLINC02383 - 4p13 [CytoView hg19]  LINC02383 - 4p13 [CytoView hg38]
Mapping of homologs : NCBILINC02383 [Mapview hg19]  LINC02383 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI476358 BX111476
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02383
Cluster EST : UnigeneHs.170605 [ NCBI ]
CGAP (NCI)Hs.170605
Alternative Splicing GalleryENSG00000248143
Gene ExpressionLINC02383 [ NCBI-GEO ]   LINC02383 [ EBI - ARRAY_EXPRESS ]   LINC02383 [ SEEK ]   LINC02383 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02383 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374436
GTEX Portal (Tissue expression)LINC02383
Human Protein AtlasENSG00000248143-LINC02383 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02383
DMDM Disease mutations105374436
Blocks (Seattle)LINC02383
Human Protein Atlas [tissue]ENSG00000248143-LINC02383 [tissue]
Protein Interaction databases
FunCoupENSG00000248143
BioGRIDLINC02383
STRING (EMBL)LINC02383
ZODIACLINC02383
Ontologies - Pathways
Huge Navigator LINC02383 [HugePedia]
snp3D : Map Gene to Disease105374436
BioCentury BCIQLINC02383
ClinGenLINC02383
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374436
Clinical trialLINC02383
Miscellaneous
canSAR (ICR)LINC02383 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02383
EVEXLINC02383
GoPubMedLINC02383
iHOPLINC02383
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:41 CEST 2018

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