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LINC02397 (long intergenic non-protein coding RNA 2397)

Identity

Other alias-
HGNC (Hugo) LINC02397
LocusID (NCBI) 100507616
Atlas_Id 79002
Location 12q22  [Link to chromosome band 12q22]
Location_base_pair Starts at 92466679 and ends at 92483947 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02397   53323
Cards
Entrez_Gene (NCBI)LINC02397  100507616  long intergenic non-protein coding RNA 2397
Aliases
GeneCards (Weizmann)LINC02397
Ensembl hg19 (Hinxton)ENSG00000205056 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205056 [Gene_View]  chr12:92466679-92483947 [Contig_View]  LINC02397 [Vega]
ICGC DataPortalENSG00000205056
TCGA cBioPortalLINC02397
AceView (NCBI)LINC02397
Genatlas (Paris)LINC02397
WikiGenes100507616
SOURCE (Princeton)LINC02397
Genetics Home Reference (NIH)LINC02397
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02397  -     chr12:92466679-92483947 +  12q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02397  -     12q22   [Description]    (hg19-Feb_2009)
EnsemblLINC02397 - 12q22 [CytoView hg19]  LINC02397 - 12q22 [CytoView hg38]
Mapping of homologs : NCBILINC02397 [Mapview hg19]  LINC02397 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123900 AL713197 AW512352 BC014496 BC036936
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02397
Cluster EST : UnigeneHs.339918 [ NCBI ]
CGAP (NCI)Hs.339918
Alternative Splicing GalleryENSG00000205056
Gene ExpressionLINC02397 [ NCBI-GEO ]   LINC02397 [ EBI - ARRAY_EXPRESS ]   LINC02397 [ SEEK ]   LINC02397 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02397 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507616
GTEX Portal (Tissue expression)LINC02397
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02397
DMDM Disease mutations100507616
Blocks (Seattle)LINC02397
Human Protein AtlasENSG00000205056
Protein Interaction databases
FunCoupENSG00000205056
BioGRIDLINC02397
STRING (EMBL)LINC02397
ZODIACLINC02397
Ontologies - Pathways
Huge Navigator LINC02397 [HugePedia]
snp3D : Map Gene to Disease100507616
BioCentury BCIQLINC02397
ClinGenLINC02397
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507616
Clinical trialLINC02397
Miscellaneous
canSAR (ICR)LINC02397 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02397
EVEXLINC02397
GoPubMedLINC02397
iHOPLINC02397
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:16:23 CEST 2017

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