Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC02399 (long intergenic non-protein coding RNA 2399)


Alias (NCBI)-
HGNC (Hugo) LINC02399
LocusID (NCBI) 105369891
Atlas_Id 79993
Location 12q21.33  [Link to chromosome band 12q21]
Location_base_pair Starts at 89947693 and ends at 89949726 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC02399   53326
Entrez_Gene (NCBI)LINC02399    long intergenic non-protein coding RNA 2399
GeneCards (Weizmann)LINC02399
Ensembl hg19 (Hinxton)ENSG00000257725 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257725 [Gene_View]  ENSG00000257725 [Sequence]  chr12:89947693-89949726 [Contig_View]  LINC02399 [Vega]
ICGC DataPortalENSG00000257725
TCGA cBioPortalLINC02399
AceView (NCBI)LINC02399
Genatlas (Paris)LINC02399
SOURCE (Princeton)LINC02399
Genetics Home Reference (NIH)LINC02399
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02399  -     chr12:89947693-89949726 +  12q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02399  -     12q21.33   [Description]    (hg19-Feb_2009)
GoldenPathLINC02399 - 12q21.33 [CytoView hg19]  LINC02399 - 12q21.33 [CytoView hg38]
genome Data Viewer NCBILINC02399 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BX090745
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02399
Alternative Splicing GalleryENSG00000257725
Gene ExpressionLINC02399 [ NCBI-GEO ]   LINC02399 [ EBI - ARRAY_EXPRESS ]   LINC02399 [ SEEK ]   LINC02399 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02399 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02399 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105369891
GTEX Portal (Tissue expression)LINC02399
Human Protein AtlasENSG00000257725-LINC02399 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02399
Blocks (Seattle)LINC02399
Human Protein Atlas [tissue]ENSG00000257725-LINC02399 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:04:57 CET 2020

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