Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02399 (long intergenic non-protein coding RNA 2399)

Identity

Other alias-
HGNC (Hugo) LINC02399
LocusID (NCBI) 105369891
Atlas_Id 79993
Location 12q21.33  [Link to chromosome band 12q21]
Location_base_pair Starts at 89947693 and ends at 89949726 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02399   53326
Cards
Entrez_Gene (NCBI)LINC02399  105369891  long intergenic non-protein coding RNA 2399
Aliases
GeneCards (Weizmann)LINC02399
Ensembl hg19 (Hinxton)ENSG00000257725 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257725 [Gene_View]  chr12:89947693-89949726 [Contig_View]  LINC02399 [Vega]
ICGC DataPortalENSG00000257725
TCGA cBioPortalLINC02399
AceView (NCBI)LINC02399
Genatlas (Paris)LINC02399
WikiGenes105369891
SOURCE (Princeton)LINC02399
Genetics Home Reference (NIH)LINC02399
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02399  -     chr12:89947693-89949726 +  12q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02399  -     12q21.33   [Description]    (hg19-Feb_2009)
EnsemblLINC02399 - 12q21.33 [CytoView hg19]  LINC02399 - 12q21.33 [CytoView hg38]
Mapping of homologs : NCBILINC02399 [Mapview hg19]  LINC02399 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX090745
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02399
Cluster EST : UnigeneHs.148998 [ NCBI ]
CGAP (NCI)Hs.148998
Alternative Splicing GalleryENSG00000257725
Gene ExpressionLINC02399 [ NCBI-GEO ]   LINC02399 [ EBI - ARRAY_EXPRESS ]   LINC02399 [ SEEK ]   LINC02399 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02399 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369891
GTEX Portal (Tissue expression)LINC02399
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02399
DMDM Disease mutations105369891
Blocks (Seattle)LINC02399
Human Protein AtlasENSG00000257725
Protein Interaction databases
FunCoupENSG00000257725
BioGRIDLINC02399
STRING (EMBL)LINC02399
ZODIACLINC02399
Ontologies - Pathways
Huge Navigator LINC02399 [HugePedia]
snp3D : Map Gene to Disease105369891
BioCentury BCIQLINC02399
ClinGenLINC02399
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369891
Clinical trialLINC02399
Miscellaneous
canSAR (ICR)LINC02399 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02399
EVEXLINC02399
GoPubMedLINC02399
iHOPLINC02399
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:16:24 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.