Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02407 (long intergenic non-protein coding RNA 2407)

Identity

Other alias-
HGNC (Hugo) LINC02407
LocusID (NCBI) 105369848
Atlas_Id 79924
Location 12q21.2  [Link to chromosome band 12q21]
Location_base_pair Starts at 76259883 and ends at 76305969 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02407   53336
Cards
Entrez_Gene (NCBI)LINC02407  105369848  long intergenic non-protein coding RNA 2407
Aliases
GeneCards (Weizmann)LINC02407
Ensembl hg19 (Hinxton)ENSG00000257219 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257219 [Gene_View]  chr12:76259883-76305969 [Contig_View]  LINC02407 [Vega]
ICGC DataPortalENSG00000257219
TCGA cBioPortalLINC02407
AceView (NCBI)LINC02407
Genatlas (Paris)LINC02407
WikiGenes105369848
SOURCE (Princeton)LINC02407
Genetics Home Reference (NIH)LINC02407
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02407  -     chr12:76259883-76305969 +  12q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02407  -     12q21.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02407 - 12q21.2 [CytoView hg19]  LINC02407 - 12q21.2 [CytoView hg38]
Mapping of homologs : NCBILINC02407 [Mapview hg19]  LINC02407 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02407
Alternative Splicing GalleryENSG00000257219
Gene ExpressionLINC02407 [ NCBI-GEO ]   LINC02407 [ EBI - ARRAY_EXPRESS ]   LINC02407 [ SEEK ]   LINC02407 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02407 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369848
GTEX Portal (Tissue expression)LINC02407
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02407
DMDM Disease mutations105369848
Blocks (Seattle)LINC02407
Human Protein AtlasENSG00000257219
Protein Interaction databases
FunCoupENSG00000257219
BioGRIDLINC02407
STRING (EMBL)LINC02407
ZODIACLINC02407
Ontologies - Pathways
Huge Navigator LINC02407 [HugePedia]
snp3D : Map Gene to Disease105369848
BioCentury BCIQLINC02407
ClinGenLINC02407
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369848
Clinical trialLINC02407
Miscellaneous
canSAR (ICR)LINC02407 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02407
EVEXLINC02407
GoPubMedLINC02407
iHOPLINC02407
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:16:25 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.