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LINC02419 (long intergenic non-protein coding RNA 2419)

Identity

Other alias-
HGNC (Hugo) LINC02419
LocusID (NCBI) 105370078
Atlas_Id 78882
Location 12q24.33  [Link to chromosome band 12q24]
Location_base_pair Starts at 130071335 and ends at 130072685 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02419   53349
Cards
Entrez_Gene (NCBI)LINC02419  105370078  long intergenic non-protein coding RNA 2419
Aliases
GeneCards (Weizmann)LINC02419
Ensembl hg19 (Hinxton)ENSG00000256906 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256906 [Gene_View]  chr12:130071335-130072685 [Contig_View]  LINC02419 [Vega]
ICGC DataPortalENSG00000256906
TCGA cBioPortalLINC02419
AceView (NCBI)LINC02419
Genatlas (Paris)LINC02419
WikiGenes105370078
SOURCE (Princeton)LINC02419
Genetics Home Reference (NIH)LINC02419
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02419  -     chr12:130071335-130072685 +  12q24.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02419  -     12q24.33   [Description]    (hg19-Feb_2009)
EnsemblLINC02419 - 12q24.33 [CytoView hg19]  LINC02419 - 12q24.33 [CytoView hg38]
Mapping of homologs : NCBILINC02419 [Mapview hg19]  LINC02419 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02419
Alternative Splicing GalleryENSG00000256906
Gene ExpressionLINC02419 [ NCBI-GEO ]   LINC02419 [ EBI - ARRAY_EXPRESS ]   LINC02419 [ SEEK ]   LINC02419 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02419 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105370078
GTEX Portal (Tissue expression)LINC02419
Human Protein AtlasENSG00000256906-LINC02419 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02419
DMDM Disease mutations105370078
Blocks (Seattle)LINC02419
Human Protein Atlas [tissue]ENSG00000256906-LINC02419 [tissue]
Protein Interaction databases
FunCoupENSG00000256906
BioGRIDLINC02419
STRING (EMBL)LINC02419
ZODIACLINC02419
Ontologies - Pathways
Huge Navigator LINC02419 [HugePedia]
snp3D : Map Gene to Disease105370078
BioCentury BCIQLINC02419
ClinGenLINC02419
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105370078
Clinical trialLINC02419
Miscellaneous
canSAR (ICR)LINC02419 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02419
EVEXLINC02419
GoPubMedLINC02419
iHOPLINC02419
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:38 CET 2017

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