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LINC02425 (long intergenic non-protein coding RNA 2425)

Identity

Other alias-
HGNC (Hugo) LINC02425
LocusID (NCBI) 105369810
Atlas_Id 79027
Location 12q14.3  [Link to chromosome band 12q14]
Location_base_pair Starts at 66027726 and ends at 66031066 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02425   53356
Cards
Entrez_Gene (NCBI)LINC02425  105369810  long intergenic non-protein coding RNA 2425
Aliases
GeneCards (Weizmann)LINC02425
Ensembl hg19 (Hinxton)ENSG00000256259 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256259 [Gene_View]  chr12:66027726-66031066 [Contig_View]  LINC02425 [Vega]
ICGC DataPortalENSG00000256259
TCGA cBioPortalLINC02425
AceView (NCBI)LINC02425
Genatlas (Paris)LINC02425
WikiGenes105369810
SOURCE (Princeton)LINC02425
Genetics Home Reference (NIH)LINC02425
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02425  -     chr12:66027726-66031066 -  12q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02425  -     12q14.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02425 - 12q14.3 [CytoView hg19]  LINC02425 - 12q14.3 [CytoView hg38]
Mapping of homologs : NCBILINC02425 [Mapview hg19]  LINC02425 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02425
Alternative Splicing GalleryENSG00000256259
Gene ExpressionLINC02425 [ NCBI-GEO ]   LINC02425 [ EBI - ARRAY_EXPRESS ]   LINC02425 [ SEEK ]   LINC02425 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02425 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369810
GTEX Portal (Tissue expression)LINC02425
Human Protein AtlasENSG00000256259-LINC02425 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02425
DMDM Disease mutations105369810
Blocks (Seattle)LINC02425
Human Protein Atlas [tissue]ENSG00000256259-LINC02425 [tissue]
Protein Interaction databases
FunCoupENSG00000256259
BioGRIDLINC02425
STRING (EMBL)LINC02425
ZODIACLINC02425
Ontologies - Pathways
Huge Navigator LINC02425 [HugePedia]
snp3D : Map Gene to Disease105369810
BioCentury BCIQLINC02425
ClinGenLINC02425
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369810
Clinical trialLINC02425
Miscellaneous
canSAR (ICR)LINC02425 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02425
EVEXLINC02425
GoPubMedLINC02425
iHOPLINC02425
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:39 CET 2017

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