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LINC02428 (long intergenic non-protein coding RNA 2428)

Identity

Other alias-
HGNC (Hugo) LINC02428
LocusID (NCBI) 101929448
Atlas_Id 79955
Location 4q24  [Link to chromosome band 4q24]
Location_base_pair Starts at 103425042 and ends at 103439728 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02428   53359
Cards
Entrez_Gene (NCBI)LINC02428  101929448  long intergenic non-protein coding RNA 2428
Aliases
GeneCards (Weizmann)LINC02428
Ensembl hg19 (Hinxton)ENSG00000248740 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248740 [Gene_View]  ENSG00000248740 [Sequence]  chr4:103425042-103439728 [Contig_View]  LINC02428 [Vega]
ICGC DataPortalENSG00000248740
TCGA cBioPortalLINC02428
AceView (NCBI)LINC02428
Genatlas (Paris)LINC02428
WikiGenes101929448
SOURCE (Princeton)LINC02428
Genetics Home Reference (NIH)LINC02428
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02428  -     chr4:103425042-103439728 +  4q24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02428  -     4q24   [Description]    (hg19-Feb_2009)
EnsemblLINC02428 - 4q24 [CytoView hg19]  LINC02428 - 4q24 [CytoView hg38]
Mapping of homologs : NCBILINC02428 [Mapview hg19]  LINC02428 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CB116995
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02428
Cluster EST : UnigeneHs.570839 [ NCBI ]
CGAP (NCI)Hs.570839
Alternative Splicing GalleryENSG00000248740
Gene ExpressionLINC02428 [ NCBI-GEO ]   LINC02428 [ EBI - ARRAY_EXPRESS ]   LINC02428 [ SEEK ]   LINC02428 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02428 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929448
GTEX Portal (Tissue expression)LINC02428
Human Protein AtlasENSG00000248740-LINC02428 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02428
DMDM Disease mutations101929448
Blocks (Seattle)LINC02428
Human Protein Atlas [tissue]ENSG00000248740-LINC02428 [tissue]
Protein Interaction databases
FunCoupENSG00000248740
BioGRIDLINC02428
STRING (EMBL)LINC02428
ZODIACLINC02428
Ontologies - Pathways
Huge Navigator LINC02428 [HugePedia]
snp3D : Map Gene to Disease101929448
BioCentury BCIQLINC02428
ClinGenLINC02428
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929448
Clinical trialLINC02428
Miscellaneous
canSAR (ICR)LINC02428 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02428
EVEXLINC02428
GoPubMedLINC02428
iHOPLINC02428
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:49 CEST 2018

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