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LINC02433 (long intergenic non-protein coding RNA 2433)

Identity

Other alias-
HGNC (Hugo) LINC02433
LocusID (NCBI) 340017
Atlas_Id 80015
Location 4q32.1  [Link to chromosome band 4q32]
Location_base_pair Starts at 157572490 and ends at 157576151 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02433   27959
Cards
Entrez_Gene (NCBI)LINC02433  340017  long intergenic non-protein coding RNA 2433
Aliases
GeneCards (Weizmann)LINC02433
Ensembl hg19 (Hinxton)ENSG00000234111 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234111 [Gene_View]  ENSG00000234111 [Sequence]  chr4:157572490-157576151 [Contig_View]  LINC02433 [Vega]
ICGC DataPortalENSG00000234111
TCGA cBioPortalLINC02433
AceView (NCBI)LINC02433
Genatlas (Paris)LINC02433
WikiGenes340017
SOURCE (Princeton)LINC02433
Genetics Home Reference (NIH)LINC02433
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02433  -     chr4:157572490-157576151 +  4q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02433  -     4q32.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02433 - 4q32.1 [CytoView hg19]  LINC02433 - 4q32.1 [CytoView hg38]
Mapping of homologs : NCBILINC02433 [Mapview hg19]  LINC02433 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043561 BC121111 BC121112
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02433
Cluster EST : UnigeneHs.428275 [ NCBI ]
CGAP (NCI)Hs.428275
Alternative Splicing GalleryENSG00000234111
Gene ExpressionLINC02433 [ NCBI-GEO ]   LINC02433 [ EBI - ARRAY_EXPRESS ]   LINC02433 [ SEEK ]   LINC02433 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02433 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)340017
GTEX Portal (Tissue expression)LINC02433
Human Protein AtlasENSG00000234111-LINC02433 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02433
DMDM Disease mutations340017
Blocks (Seattle)LINC02433
Human Protein Atlas [tissue]ENSG00000234111-LINC02433 [tissue]
IPIIPI00981967   
Protein Interaction databases
FunCoupENSG00000234111
BioGRIDLINC02433
STRING (EMBL)LINC02433
ZODIACLINC02433
Ontologies - Pathways
Huge Navigator LINC02433 [HugePedia]
snp3D : Map Gene to Disease340017
BioCentury BCIQLINC02433
ClinGenLINC02433
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340017
Clinical trialLINC02433
Miscellaneous
canSAR (ICR)LINC02433 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02433
EVEXLINC02433
GoPubMedLINC02433
iHOPLINC02433
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:49 CEST 2018

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