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LINC02436 (long intergenic non-protein coding RNA 2436)

Identity

Other alias-
HGNC (Hugo) LINC02436
LocusID (NCBI) 101928877
Atlas_Id 79259
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 185051896 and ends at 185107248 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02436   53368
Cards
Entrez_Gene (NCBI)LINC02436  101928877  long intergenic non-protein coding RNA 2436
Aliases
GeneCards (Weizmann)LINC02436
Ensembl hg19 (Hinxton)ENSG00000250754 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250754 [Gene_View]  ENSG00000250754 [Sequence]  chr4:185051896-185107248 [Contig_View]  LINC02436 [Vega]
ICGC DataPortalENSG00000250754
TCGA cBioPortalLINC02436
AceView (NCBI)LINC02436
Genatlas (Paris)LINC02436
WikiGenes101928877
SOURCE (Princeton)LINC02436
Genetics Home Reference (NIH)LINC02436
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02436  -     chr4:185051896-185107248 +  4q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02436  -     4q35.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02436 - 4q35.1 [CytoView hg19]  LINC02436 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBILINC02436 [Mapview hg19]  LINC02436 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY494057 AY494058 BC043280 BG772330
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02436
Cluster EST : UnigeneHs.733839 [ NCBI ]
CGAP (NCI)Hs.733839
Alternative Splicing GalleryENSG00000250754
Gene ExpressionLINC02436 [ NCBI-GEO ]   LINC02436 [ EBI - ARRAY_EXPRESS ]   LINC02436 [ SEEK ]   LINC02436 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02436 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928877
GTEX Portal (Tissue expression)LINC02436
Human Protein AtlasENSG00000250754-LINC02436 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02436
DMDM Disease mutations101928877
Blocks (Seattle)LINC02436
Human Protein Atlas [tissue]ENSG00000250754-LINC02436 [tissue]
Protein Interaction databases
FunCoupENSG00000250754
BioGRIDLINC02436
STRING (EMBL)LINC02436
ZODIACLINC02436
Ontologies - Pathways
Huge Navigator LINC02436 [HugePedia]
snp3D : Map Gene to Disease101928877
BioCentury BCIQLINC02436
ClinGenLINC02436
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928877
Clinical trialLINC02436
Miscellaneous
canSAR (ICR)LINC02436 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02436
EVEXLINC02436
GoPubMedLINC02436
iHOPLINC02436
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:50 CEST 2018

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