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LINC02441 (long intergenic non-protein coding RNA 2441)

Identity

Alias_symbol (synonym)CRAT8
Other alias
HGNC (Hugo) LINC02441
LocusID (NCBI) 105370070
Atlas_Id 78879
Location 12q24.32  [Link to chromosome band 12q24]
Location_base_pair Starts at 128023788 and ends at 128027166 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02441   53373
Cards
Entrez_Gene (NCBI)LINC02441  105370070  long intergenic non-protein coding RNA 2441
AliasesCRAT8
GeneCards (Weizmann)LINC02441
Ensembl hg19 (Hinxton)ENSG00000256643 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256643 [Gene_View]  chr12:128023788-128027166 [Contig_View]  LINC02441 [Vega]
ICGC DataPortalENSG00000256643
TCGA cBioPortalLINC02441
AceView (NCBI)LINC02441
Genatlas (Paris)LINC02441
WikiGenes105370070
SOURCE (Princeton)LINC02441
Genetics Home Reference (NIH)LINC02441
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02441  -     chr12:128023788-128027166 -  12q24.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02441  -     12q24.32   [Description]    (hg19-Feb_2009)
EnsemblLINC02441 - 12q24.32 [CytoView hg19]  LINC02441 - 12q24.32 [CytoView hg38]
Mapping of homologs : NCBILINC02441 [Mapview hg19]  LINC02441 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA425353 DA428755
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02441
Alternative Splicing GalleryENSG00000256643
Gene ExpressionLINC02441 [ NCBI-GEO ]   LINC02441 [ EBI - ARRAY_EXPRESS ]   LINC02441 [ SEEK ]   LINC02441 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02441 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105370070
GTEX Portal (Tissue expression)LINC02441
Human Protein AtlasENSG00000256643-LINC02441 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02441
DMDM Disease mutations105370070
Blocks (Seattle)LINC02441
Human Protein Atlas [tissue]ENSG00000256643-LINC02441 [tissue]
Protein Interaction databases
FunCoupENSG00000256643
BioGRIDLINC02441
STRING (EMBL)LINC02441
ZODIACLINC02441
Ontologies - Pathways
Huge Navigator LINC02441 [HugePedia]
snp3D : Map Gene to Disease105370070
BioCentury BCIQLINC02441
ClinGenLINC02441
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105370070
Clinical trialLINC02441
Miscellaneous
canSAR (ICR)LINC02441 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02441
EVEXLINC02441
GoPubMedLINC02441
iHOPLINC02441
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:40 CET 2017

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