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LINC02444 (long intergenic non-protein coding RNA 2444)

Identity

Other alias-
HGNC (Hugo) LINC02444
LocusID (NCBI) 101928137
Atlas_Id 79805
Location 12q21.1  [Link to chromosome band 12q21]
Location_base_pair Starts at 73159190 and ends at 73208317 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02444   53376
Cards
Entrez_Gene (NCBI)LINC02444  101928137  long intergenic non-protein coding RNA 2444
Aliases
GeneCards (Weizmann)LINC02444
Ensembl hg19 (Hinxton)ENSG00000258123 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258123 [Gene_View]  chr12:73159190-73208317 [Contig_View]  LINC02444 [Vega]
ICGC DataPortalENSG00000258123
TCGA cBioPortalLINC02444
AceView (NCBI)LINC02444
Genatlas (Paris)LINC02444
WikiGenes101928137
SOURCE (Princeton)LINC02444
Genetics Home Reference (NIH)LINC02444
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02444  -     chr12:73159190-73208317 +  12q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02444  -     12q21.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02444 - 12q21.1 [CytoView hg19]  LINC02444 - 12q21.1 [CytoView hg38]
Mapping of homologs : NCBILINC02444 [Mapview hg19]  LINC02444 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK310448
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02444
Cluster EST : UnigeneHs.694666 [ NCBI ]
CGAP (NCI)Hs.694666
Alternative Splicing GalleryENSG00000258123
Gene ExpressionLINC02444 [ NCBI-GEO ]   LINC02444 [ EBI - ARRAY_EXPRESS ]   LINC02444 [ SEEK ]   LINC02444 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02444 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928137
GTEX Portal (Tissue expression)LINC02444
Human Protein AtlasENSG00000258123-LINC02444 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02444
DMDM Disease mutations101928137
Blocks (Seattle)LINC02444
Human Protein Atlas [tissue]ENSG00000258123-LINC02444 [tissue]
Protein Interaction databases
FunCoupENSG00000258123
BioGRIDLINC02444
STRING (EMBL)LINC02444
ZODIACLINC02444
Ontologies - Pathways
Huge Navigator LINC02444 [HugePedia]
snp3D : Map Gene to Disease101928137
BioCentury BCIQLINC02444
ClinGenLINC02444
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928137
Clinical trialLINC02444
Miscellaneous
canSAR (ICR)LINC02444 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02444
EVEXLINC02444
GoPubMedLINC02444
iHOPLINC02444
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:40 CET 2017

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