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LINC02447 (long intergenic non-protein coding RNA 2447)

Identity

Other alias-
HGNC (Hugo) LINC02447
LocusID (NCBI) 730971
Atlas_Id 80125
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 7097424 and ends at 7103376 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02447   53379
Cards
Entrez_Gene (NCBI)LINC02447  730971  long intergenic non-protein coding RNA 2447
Aliases
GeneCards (Weizmann)LINC02447
Ensembl hg19 (Hinxton)ENSG00000245468 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245468 [Gene_View]  ENSG00000245468 [Sequence]  chr4:7097424-7103376 [Contig_View]  LINC02447 [Vega]
ICGC DataPortalENSG00000245468
TCGA cBioPortalLINC02447
AceView (NCBI)LINC02447
Genatlas (Paris)LINC02447
WikiGenes730971
SOURCE (Princeton)LINC02447
Genetics Home Reference (NIH)LINC02447
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02447  -     chr4:7097424-7103376 -  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02447  -     4p16.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02447 - 4p16.1 [CytoView hg19]  LINC02447 - 4p16.1 [CytoView hg38]
Mapping of homologs : NCBILINC02447 [Mapview hg19]  LINC02447 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094096 BC045770
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02447
Cluster EST : UnigeneHs.591718 [ NCBI ]
CGAP (NCI)Hs.591718
Alternative Splicing GalleryENSG00000245468
Gene ExpressionLINC02447 [ NCBI-GEO ]   LINC02447 [ EBI - ARRAY_EXPRESS ]   LINC02447 [ SEEK ]   LINC02447 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02447 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)730971
GTEX Portal (Tissue expression)LINC02447
Human Protein AtlasENSG00000245468-LINC02447 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02447
DMDM Disease mutations730971
Blocks (Seattle)LINC02447
Human Protein Atlas [tissue]ENSG00000245468-LINC02447 [tissue]
IPIIPI00929569   
Protein Interaction databases
FunCoupENSG00000245468
BioGRIDLINC02447
STRING (EMBL)LINC02447
ZODIACLINC02447
Ontologies - Pathways
Huge Navigator LINC02447 [HugePedia]
snp3D : Map Gene to Disease730971
BioCentury BCIQLINC02447
ClinGenLINC02447
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD730971
Clinical trialLINC02447
Miscellaneous
canSAR (ICR)LINC02447 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02447
EVEXLINC02447
GoPubMedLINC02447
iHOPLINC02447
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:51 CEST 2018

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