Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02451 (long intergenic non-protein coding RNA 2451)

Identity

Other alias-
HGNC (Hugo) LINC02451
LocusID (NCBI) 105369738
Atlas_Id 78974
Location 12q12  [Link to chromosome band 12q12]
Location_base_pair Starts at 42646583 and ends at 42682816 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02451   53383
Cards
Entrez_Gene (NCBI)LINC02451  105369738  long intergenic non-protein coding RNA 2451
Aliases
GeneCards (Weizmann)LINC02451
Ensembl hg19 (Hinxton)ENSG00000257164 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000257164 [Gene_View]  chr12:42646583-42682816 [Contig_View]  LINC02451 [Vega]
ICGC DataPortalENSG00000257164
TCGA cBioPortalLINC02451
AceView (NCBI)LINC02451
Genatlas (Paris)LINC02451
WikiGenes105369738
SOURCE (Princeton)LINC02451
Genetics Home Reference (NIH)LINC02451
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02451  -     chr12:42646583-42682816 +  12q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02451  -     12q12   [Description]    (hg19-Feb_2009)
EnsemblLINC02451 - 12q12 [CytoView hg19]  LINC02451 - 12q12 [CytoView hg38]
Mapping of homologs : NCBILINC02451 [Mapview hg19]  LINC02451 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB020179 DB048554
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02451
Cluster EST : UnigeneHs.569161 [ NCBI ]
CGAP (NCI)Hs.569161
Alternative Splicing GalleryENSG00000257164
Gene ExpressionLINC02451 [ NCBI-GEO ]   LINC02451 [ EBI - ARRAY_EXPRESS ]   LINC02451 [ SEEK ]   LINC02451 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02451 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369738
GTEX Portal (Tissue expression)LINC02451
Human Protein AtlasENSG00000257164-LINC02451 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02451
DMDM Disease mutations105369738
Blocks (Seattle)LINC02451
Human Protein Atlas [tissue]ENSG00000257164-LINC02451 [tissue]
Protein Interaction databases
FunCoupENSG00000257164
BioGRIDLINC02451
STRING (EMBL)LINC02451
ZODIACLINC02451
Ontologies - Pathways
Huge Navigator LINC02451 [HugePedia]
snp3D : Map Gene to Disease105369738
BioCentury BCIQLINC02451
ClinGenLINC02451
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369738
Clinical trialLINC02451
Miscellaneous
canSAR (ICR)LINC02451 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02451
EVEXLINC02451
GoPubMedLINC02451
iHOPLINC02451
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:41 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.