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LINC02453 (long intergenic non-protein coding RNA 2453)

Identity

Other alias-
HGNC (Hugo) LINC02453
LocusID (NCBI) 643770
Atlas_Id 79798
Location 12q23.1  [Link to chromosome band 12q23]
Location_base_pair Starts at 98485544 and ends at 98503855 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC02453   53392
Cards
Entrez_Gene (NCBI)LINC02453  643770  long intergenic non-protein coding RNA 2453
Aliases
GeneCards (Weizmann)LINC02453
Ensembl hg19 (Hinxton)ENSG00000245017 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245017 [Gene_View]  chr12:98485544-98503855 [Contig_View]  LINC02453 [Vega]
ICGC DataPortalENSG00000245017
TCGA cBioPortalLINC02453
AceView (NCBI)LINC02453
Genatlas (Paris)LINC02453
WikiGenes643770
SOURCE (Princeton)LINC02453
Genetics Home Reference (NIH)LINC02453
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02453  -     chr12:98485544-98503855 -  12q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02453  -     12q23.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02453 - 12q23.1 [CytoView hg19]  LINC02453 - 12q23.1 [CytoView hg38]
Mapping of homologs : NCBILINC02453 [Mapview hg19]  LINC02453 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126817
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02453
Cluster EST : UnigeneHs.129589 [ NCBI ]
CGAP (NCI)Hs.129589
Alternative Splicing GalleryENSG00000245017
Gene ExpressionLINC02453 [ NCBI-GEO ]   LINC02453 [ EBI - ARRAY_EXPRESS ]   LINC02453 [ SEEK ]   LINC02453 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02453 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643770
GTEX Portal (Tissue expression)LINC02453
Human Protein AtlasENSG00000245017-LINC02453 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02453
DMDM Disease mutations643770
Blocks (Seattle)LINC02453
Human Protein Atlas [tissue]ENSG00000245017-LINC02453 [tissue]
IPIIPI01025716   
Protein Interaction databases
FunCoupENSG00000245017
BioGRIDLINC02453
STRING (EMBL)LINC02453
ZODIACLINC02453
Ontologies - Pathways
Huge Navigator LINC02453 [HugePedia]
snp3D : Map Gene to Disease643770
BioCentury BCIQLINC02453
ClinGenLINC02453
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643770
Clinical trialLINC02453
Miscellaneous
canSAR (ICR)LINC02453 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02453
EVEXLINC02453
GoPubMedLINC02453
iHOPLINC02453
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:41 CET 2017

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