Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC02458 (long intergenic non-protein coding RNA 2458)


Alias (NCBI)-
HGNC (Hugo) LINC02458
LocusID (NCBI) 728084
Atlas_Id 79626
Location 12q21.33  [Link to chromosome band 12q21]
Location_base_pair Starts at 89011126 and ends at 89019692 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC02458   53394
Entrez_Gene (NCBI)LINC02458    long intergenic non-protein coding RNA 2458
GeneCards (Weizmann)LINC02458
Ensembl hg19 (Hinxton)ENSG00000246363 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000246363 [Gene_View]  ENSG00000246363 [Sequence]  chr12:89011126-89019692 [Contig_View]  LINC02458 [Vega]
ICGC DataPortalENSG00000246363
TCGA cBioPortalLINC02458
AceView (NCBI)LINC02458
Genatlas (Paris)LINC02458
SOURCE (Princeton)LINC02458
Genetics Home Reference (NIH)LINC02458
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02458  -     chr12:89011126-89019692 -  12q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02458  -     12q21.33   [Description]    (hg19-Feb_2009)
GoldenPathLINC02458 - 12q21.33 [CytoView hg19]  LINC02458 - 12q21.33 [CytoView hg38]
genome Data Viewer NCBILINC02458 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK055062
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02458
Alternative Splicing GalleryENSG00000246363
Gene ExpressionLINC02458 [ NCBI-GEO ]   LINC02458 [ EBI - ARRAY_EXPRESS ]   LINC02458 [ SEEK ]   LINC02458 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02458 [ Firebrowse - Broad ]
GenevisibleExpression of LINC02458 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728084
GTEX Portal (Tissue expression)LINC02458
Human Protein AtlasENSG00000246363-LINC02458 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02458
Blocks (Seattle)LINC02458
Human Protein Atlas [tissue]ENSG00000246363-LINC02458 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:05:06 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us