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LINC02461 (long intergenic non-protein coding RNA 2461)

Identity

Other alias-
HGNC (Hugo) LINC02461
LocusID (NCBI) 105369740
Atlas_Id 79808
Location 12q12  [Link to chromosome band 12q12]
Location_base_pair Starts at 43155315 and ends at 43163110 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02461   53398
Cards
Entrez_Gene (NCBI)LINC02461  105369740  long intergenic non-protein coding RNA 2461
Aliases
GeneCards (Weizmann)LINC02461
Ensembl hg19 (Hinxton)ENSG00000258331 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258331 [Gene_View]  chr12:43155315-43163110 [Contig_View]  LINC02461 [Vega]
ICGC DataPortalENSG00000258331
TCGA cBioPortalLINC02461
AceView (NCBI)LINC02461
Genatlas (Paris)LINC02461
WikiGenes105369740
SOURCE (Princeton)LINC02461
Genetics Home Reference (NIH)LINC02461
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02461  -     chr12:43155315-43163110 +  12q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02461  -     12q12   [Description]    (hg19-Feb_2009)
EnsemblLINC02461 - 12q12 [CytoView hg19]  LINC02461 - 12q12 [CytoView hg38]
Mapping of homologs : NCBILINC02461 [Mapview hg19]  LINC02461 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI767423
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02461
Cluster EST : UnigeneHs.577746 [ NCBI ]
CGAP (NCI)Hs.577746
Alternative Splicing GalleryENSG00000258331
Gene ExpressionLINC02461 [ NCBI-GEO ]   LINC02461 [ EBI - ARRAY_EXPRESS ]   LINC02461 [ SEEK ]   LINC02461 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02461 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369740
GTEX Portal (Tissue expression)LINC02461
Human Protein AtlasENSG00000258331-LINC02461 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02461
DMDM Disease mutations105369740
Blocks (Seattle)LINC02461
Human Protein Atlas [tissue]ENSG00000258331-LINC02461 [tissue]
Protein Interaction databases
FunCoupENSG00000258331
BioGRIDLINC02461
STRING (EMBL)LINC02461
ZODIACLINC02461
Ontologies - Pathways
Huge Navigator LINC02461 [HugePedia]
snp3D : Map Gene to Disease105369740
BioCentury BCIQLINC02461
ClinGenLINC02461
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369740
Clinical trialLINC02461
Miscellaneous
canSAR (ICR)LINC02461 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02461
EVEXLINC02461
GoPubMedLINC02461
iHOPLINC02461
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:26:42 CET 2017

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