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LINC02462 (long intergenic non-protein coding RNA 2462)

Identity

Other alias-
HGNC (Hugo) LINC02462
LocusID (NCBI) 105377434
Atlas_Id 80112
Location 4q28.3  [Link to chromosome band 4q28]
Location_base_pair Starts at 134423868 and ends at 134545504 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02462   53399
Cards
Entrez_Gene (NCBI)LINC02462  105377434  long intergenic non-protein coding RNA 2462
Aliases
GeneCards (Weizmann)LINC02462
Ensembl hg19 (Hinxton)ENSG00000251291 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251291 [Gene_View]  ENSG00000251291 [Sequence]  chr4:134423868-134545504 [Contig_View]  LINC02462 [Vega]
ICGC DataPortalENSG00000251291
TCGA cBioPortalLINC02462
AceView (NCBI)LINC02462
Genatlas (Paris)LINC02462
WikiGenes105377434
SOURCE (Princeton)LINC02462
Genetics Home Reference (NIH)LINC02462
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02462  -     chr4:134423868-134545504 +  4q28.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02462  -     4q28.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02462 - 4q28.3 [CytoView hg19]  LINC02462 - 4q28.3 [CytoView hg38]
Mapping of homologs : NCBILINC02462 [Mapview hg19]  LINC02462 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX117354
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02462
Cluster EST : UnigeneHs.738318 [ NCBI ]
CGAP (NCI)Hs.738318
Alternative Splicing GalleryENSG00000251291
Gene ExpressionLINC02462 [ NCBI-GEO ]   LINC02462 [ EBI - ARRAY_EXPRESS ]   LINC02462 [ SEEK ]   LINC02462 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02462 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377434
GTEX Portal (Tissue expression)LINC02462
Human Protein AtlasENSG00000251291-LINC02462 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02462
DMDM Disease mutations105377434
Blocks (Seattle)LINC02462
Human Protein Atlas [tissue]ENSG00000251291-LINC02462 [tissue]
Protein Interaction databases
FunCoupENSG00000251291
BioGRIDLINC02462
STRING (EMBL)LINC02462
ZODIACLINC02462
Ontologies - Pathways
Huge Navigator LINC02462 [HugePedia]
snp3D : Map Gene to Disease105377434
BioCentury BCIQLINC02462
ClinGenLINC02462
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377434
Clinical trialLINC02462
Miscellaneous
canSAR (ICR)LINC02462 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02462
EVEXLINC02462
GoPubMedLINC02462
iHOPLINC02462
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:53 CEST 2018

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