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LINC02478 (long intergenic non-protein coding RNA 2478)

Identity

Other alias-
HGNC (Hugo) LINC02478
LocusID (NCBI) 100505984
Atlas_Id 79874
Location 2q24.2  [Link to chromosome band 2q24]
Location_base_pair Starts at 160257719 and ends at 160271895 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02478   53446
Cards
Entrez_Gene (NCBI)LINC02478  100505984  long intergenic non-protein coding RNA 2478
Aliases
GeneCards (Weizmann)LINC02478
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:160257719-160271895 [Contig_View]  LINC02478 [Vega]
TCGA cBioPortalLINC02478
AceView (NCBI)LINC02478
Genatlas (Paris)LINC02478
WikiGenes100505984
SOURCE (Princeton)LINC02478
Genetics Home Reference (NIH)LINC02478
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02478  -     chr2:160257719-160271895 -  2q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02478  -     2q24.2   [Description]    (hg19-Feb_2009)
EnsemblLINC02478 - 2q24.2 [CytoView hg19]  LINC02478 - 2q24.2 [CytoView hg38]
Mapping of homologs : NCBILINC02478 [Mapview hg19]  LINC02478 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG184775 HY050597
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02478
Cluster EST : UnigeneHs.729532 [ NCBI ]
CGAP (NCI)Hs.729532
Gene ExpressionLINC02478 [ NCBI-GEO ]   LINC02478 [ EBI - ARRAY_EXPRESS ]   LINC02478 [ SEEK ]   LINC02478 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02478 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505984
GTEX Portal (Tissue expression)LINC02478
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02478
DMDM Disease mutations100505984
Blocks (Seattle)LINC02478
Protein Interaction databases
BioGRIDLINC02478
STRING (EMBL)LINC02478
ZODIACLINC02478
Ontologies - Pathways
Huge Navigator LINC02478 [HugePedia]
snp3D : Map Gene to Disease100505984
BioCentury BCIQLINC02478
ClinGenLINC02478
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505984
Clinical trialLINC02478
Miscellaneous
canSAR (ICR)LINC02478 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02478
EVEXLINC02478
GoPubMedLINC02478
iHOPLINC02478
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:20 CET 2017

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