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LINC02480 (long intergenic non-protein coding RNA 2480)

Identity

Other alias-
HGNC (Hugo) LINC02480
LocusID (NCBI) 105377652
Atlas_Id 79195
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 52044805 and ends at 52046919 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02480   53454
Cards
Entrez_Gene (NCBI)LINC02480  105377652  long intergenic non-protein coding RNA 2480
Aliases
GeneCards (Weizmann)LINC02480
Ensembl hg19 (Hinxton)ENSG00000251040 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251040 [Gene_View]  ENSG00000251040 [Sequence]  chr4:52044805-52046919 [Contig_View]  LINC02480 [Vega]
ICGC DataPortalENSG00000251040
TCGA cBioPortalLINC02480
AceView (NCBI)LINC02480
Genatlas (Paris)LINC02480
WikiGenes105377652
SOURCE (Princeton)LINC02480
Genetics Home Reference (NIH)LINC02480
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02480  -     chr4:52044805-52046919 +  4q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02480  -     4q12   [Description]    (hg19-Feb_2009)
EnsemblLINC02480 - 4q12 [CytoView hg19]  LINC02480 - 4q12 [CytoView hg38]
Mapping of homologs : NCBILINC02480 [Mapview hg19]  LINC02480 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BU852357
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02480
Cluster EST : UnigeneHs.298335 [ NCBI ]
CGAP (NCI)Hs.298335
Alternative Splicing GalleryENSG00000251040
Gene ExpressionLINC02480 [ NCBI-GEO ]   LINC02480 [ EBI - ARRAY_EXPRESS ]   LINC02480 [ SEEK ]   LINC02480 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02480 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105377652
GTEX Portal (Tissue expression)LINC02480
Human Protein AtlasENSG00000251040-LINC02480 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02480
DMDM Disease mutations105377652
Blocks (Seattle)LINC02480
Human Protein Atlas [tissue]ENSG00000251040-LINC02480 [tissue]
Protein Interaction databases
FunCoupENSG00000251040
BioGRIDLINC02480
STRING (EMBL)LINC02480
ZODIACLINC02480
Ontologies - Pathways
Huge Navigator LINC02480 [HugePedia]
snp3D : Map Gene to Disease105377652
BioCentury BCIQLINC02480
ClinGenLINC02480
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105377652
Clinical trialLINC02480
Miscellaneous
canSAR (ICR)LINC02480 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02480
EVEXLINC02480
GoPubMedLINC02480
iHOPLINC02480
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:55 CEST 2018

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