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LINC02482 (long intergenic non-protein coding RNA 2482)

Identity

Other alias-
HGNC (Hugo) LINC02482
LocusID (NCBI) 105374366
Atlas_Id 79992
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 6670728 and ends at 6673881 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02482   53458
Cards
Entrez_Gene (NCBI)LINC02482  105374366  long intergenic non-protein coding RNA 2482
Aliases
GeneCards (Weizmann)LINC02482
Ensembl hg19 (Hinxton)ENSG00000251580 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251580 [Gene_View]  ENSG00000251580 [Sequence]  chr4:6670728-6673881 [Contig_View]  LINC02482 [Vega]
ICGC DataPortalENSG00000251580
TCGA cBioPortalLINC02482
AceView (NCBI)LINC02482
Genatlas (Paris)LINC02482
WikiGenes105374366
SOURCE (Princeton)LINC02482
Genetics Home Reference (NIH)LINC02482
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02482  -     chr4:6670728-6673881 -  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02482  -     4p16.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02482 - 4p16.1 [CytoView hg19]  LINC02482 - 4p16.1 [CytoView hg38]
Mapping of homologs : NCBILINC02482 [Mapview hg19]  LINC02482 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK074776 BX100005 HY022020 HY205276
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02482
Cluster EST : UnigeneHs.438950 [ NCBI ]
CGAP (NCI)Hs.438950
Alternative Splicing GalleryENSG00000251580
Gene ExpressionLINC02482 [ NCBI-GEO ]   LINC02482 [ EBI - ARRAY_EXPRESS ]   LINC02482 [ SEEK ]   LINC02482 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02482 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374366
GTEX Portal (Tissue expression)LINC02482
Human Protein AtlasENSG00000251580-LINC02482 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02482
DMDM Disease mutations105374366
Blocks (Seattle)LINC02482
Human Protein Atlas [tissue]ENSG00000251580-LINC02482 [tissue]
Protein Interaction databases
FunCoupENSG00000251580
BioGRIDLINC02482
STRING (EMBL)LINC02482
ZODIACLINC02482
Ontologies - Pathways
Huge Navigator LINC02482 [HugePedia]
snp3D : Map Gene to Disease105374366
BioCentury BCIQLINC02482
ClinGenLINC02482
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374366
Clinical trialLINC02482
Miscellaneous
canSAR (ICR)LINC02482 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02482
EVEXLINC02482
GoPubMedLINC02482
iHOPLINC02482
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:55 CEST 2018

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