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LINC02484 (long intergenic non-protein coding RNA 2484)

Identity

Other alias-
HGNC (Hugo) LINC02484
LocusID (NCBI) 105374394
Atlas_Id 79694
Location 4p15.1  [Link to chromosome band 4p15]
Location_base_pair Starts at 34121411 and ends at 34269747 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02484   53459
Cards
Entrez_Gene (NCBI)LINC02484  105374394  long intergenic non-protein coding RNA 2484
Aliases
GeneCards (Weizmann)LINC02484
Ensembl hg19 (Hinxton)ENSG00000248685 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248685 [Gene_View]  ENSG00000248685 [Sequence]  chr4:34121411-34269747 [Contig_View]  LINC02484 [Vega]
ICGC DataPortalENSG00000248685
TCGA cBioPortalLINC02484
AceView (NCBI)LINC02484
Genatlas (Paris)LINC02484
WikiGenes105374394
SOURCE (Princeton)LINC02484
Genetics Home Reference (NIH)LINC02484
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02484  -     chr4:34121411-34269747 -  4p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02484  -     4p15.1   [Description]    (hg19-Feb_2009)
EnsemblLINC02484 - 4p15.1 [CytoView hg19]  LINC02484 - 4p15.1 [CytoView hg38]
Mapping of homologs : NCBILINC02484 [Mapview hg19]  LINC02484 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AV690850 CB164253
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02484
Cluster EST : UnigeneHs.570782 [ NCBI ]
CGAP (NCI)Hs.570782
Alternative Splicing GalleryENSG00000248685
Gene ExpressionLINC02484 [ NCBI-GEO ]   LINC02484 [ EBI - ARRAY_EXPRESS ]   LINC02484 [ SEEK ]   LINC02484 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02484 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105374394
GTEX Portal (Tissue expression)LINC02484
Human Protein AtlasENSG00000248685-LINC02484 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02484
DMDM Disease mutations105374394
Blocks (Seattle)LINC02484
Human Protein Atlas [tissue]ENSG00000248685-LINC02484 [tissue]
Protein Interaction databases
FunCoupENSG00000248685
BioGRIDLINC02484
STRING (EMBL)LINC02484
ZODIACLINC02484
Ontologies - Pathways
Huge Navigator LINC02484 [HugePedia]
snp3D : Map Gene to Disease105374394
BioCentury BCIQLINC02484
ClinGenLINC02484
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105374394
Clinical trialLINC02484
Miscellaneous
canSAR (ICR)LINC02484 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02484
EVEXLINC02484
GoPubMedLINC02484
iHOPLINC02484
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:57:56 CEST 2018

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