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LINC02486 (long intergenic non-protein coding RNA 2486)

Identity

Alias_symbol (synonym)DKFZP434I0714
Other alias
HGNC (Hugo) LINC02486
LocusID (NCBI) 54553
Atlas_Id 79063
Location 4q31.3  [Link to chromosome band 4q31]
Location_base_pair Starts at 152536264 and ends at 152539263 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02486   25288
Cards
Entrez_Gene (NCBI)LINC02486  54553  long intergenic non-protein coding RNA 2486
AliasesDKFZP434I0714
GeneCards (Weizmann)LINC02486
Ensembl hg19 (Hinxton)ENSG00000268471 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000268471 [Gene_View]  ENSG00000268471 [Sequence]  chr4:152536264-152539263 [Contig_View]  LINC02486 [Vega]
ICGC DataPortalENSG00000268471
TCGA cBioPortalLINC02486
AceView (NCBI)LINC02486
Genatlas (Paris)LINC02486
WikiGenes54553
SOURCE (Princeton)LINC02486
Genetics Home Reference (NIH)LINC02486
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02486  -     chr4:152536264-152539263 +  4q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02486  -     4q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC02486 - 4q31.3 [CytoView hg19]  LINC02486 - 4q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC02486 [Mapview hg19]  LINC02486 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL137273 BC034819
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02486
Cluster EST : UnigeneHs.142307 [ NCBI ]
CGAP (NCI)Hs.142307
Alternative Splicing GalleryENSG00000268471
Gene ExpressionLINC02486 [ NCBI-GEO ]   LINC02486 [ EBI - ARRAY_EXPRESS ]   LINC02486 [ SEEK ]   LINC02486 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02486 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)54553
GTEX Portal (Tissue expression)LINC02486
Human Protein AtlasENSG00000268471-LINC02486 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02486
DMDM Disease mutations54553
Blocks (Seattle)LINC02486
Human Protein Atlas [tissue]ENSG00000268471-LINC02486 [tissue]
IPIIPI00018093   
Protein Interaction databases
FunCoupENSG00000268471
BioGRIDLINC02486
STRING (EMBL)LINC02486
ZODIACLINC02486
Ontologies - Pathways
Huge Navigator LINC02486 [HugePedia]
snp3D : Map Gene to Disease54553
BioCentury BCIQLINC02486
ClinGenLINC02486
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54553
Clinical trialLINC02486
Miscellaneous
canSAR (ICR)LINC02486 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02486
EVEXLINC02486
GoPubMedLINC02486
iHOPLINC02486
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:56 CEST 2018

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