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LINC02487 (long intergenic non-protein coding RNA 2487)

Identity

Other alias-
HGNC (Hugo) LINC02487
LocusID (NCBI) 441178
Atlas_Id 79185
Location 6q27  [Link to chromosome band 6q27]
Location_base_pair Starts at 167679626 and ends at 167683787 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC02487   53466
Cards
Entrez_Gene (NCBI)LINC02487  441178  long intergenic non-protein coding RNA 2487
Aliases
GeneCards (Weizmann)LINC02487
Ensembl hg19 (Hinxton)ENSG00000203688 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203688 [Gene_View]  ENSG00000203688 [Sequence]  chr6:167679626-167683787 [Contig_View]  LINC02487 [Vega]
ICGC DataPortalENSG00000203688
TCGA cBioPortalLINC02487
AceView (NCBI)LINC02487
Genatlas (Paris)LINC02487
WikiGenes441178
SOURCE (Princeton)LINC02487
Genetics Home Reference (NIH)LINC02487
Genomic and cartography
GoldenPath hg38 (UCSC)LINC02487  -     chr6:167679626-167683787 -  6q27   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC02487  -     6q27   [Description]    (hg19-Feb_2009)
EnsemblLINC02487 - 6q27 [CytoView hg19]  LINC02487 - 6q27 [CytoView hg38]
Mapping of homologs : NCBILINC02487 [Mapview hg19]  LINC02487 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056600 AL832737 BC093745 BC111990
RefSeq transcript (Entrez)NM_001025489
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC02487
Cluster EST : UnigeneHs.628956 [ NCBI ]
CGAP (NCI)Hs.628956
Alternative Splicing GalleryENSG00000203688
Gene ExpressionLINC02487 [ NCBI-GEO ]   LINC02487 [ EBI - ARRAY_EXPRESS ]   LINC02487 [ SEEK ]   LINC02487 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC02487 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)441178
GTEX Portal (Tissue expression)LINC02487
Human Protein AtlasENSG00000203688-LINC02487 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC02487
DMDM Disease mutations441178
Blocks (Seattle)LINC02487
Human Protein Atlas [tissue]ENSG00000203688-LINC02487 [tissue]
IPIIPI00402588   IPI00982152   
Protein Interaction databases
FunCoupENSG00000203688
BioGRIDLINC02487
STRING (EMBL)LINC02487
ZODIACLINC02487
Ontologies - Pathways
Huge Navigator LINC02487 [HugePedia]
snp3D : Map Gene to Disease441178
BioCentury BCIQLINC02487
ClinGenLINC02487
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441178
Clinical trialLINC02487
Miscellaneous
canSAR (ICR)LINC02487 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC02487
EVEXLINC02487
GoPubMedLINC02487
iHOPLINC02487
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:57:56 CEST 2018

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